Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:37964527-38204674

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fchsd1 18 37957431 to 37969774 12343 - protein coding gene FCH and double SH3 domains 1
Cpgi9959 18 37969404 to 37970198 794 CpG island CpG island 9959
Tssr153008 18 37969742 to 37969782 40 - TSS region transcription start site region 153008
Tssr153009 18 37969970 to 37969981 11 - TSS region transcription start site region 153009
Arap3 18 37972624 to 37997574 24950 - protein coding gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
Mir6981 18 37974503 to 37974617 114 - miRNA gene microRNA 6981
Cpgi9960 18 37985265 to 37985477 212 CpG island CpG island 9960
Tssr153010 18 37987170 to 37987174 4 - TSS region transcription start site region 153010
Mir6980 18 37990887 to 37990945 58 - miRNA gene microRNA 6980
Tssr153011 18 37997528 to 37997540 12 - TSS region transcription start site region 153011
Tssr153012 18 37997543 to 37997569 26 - TSS region transcription start site region 153012
Tssr150775 18 37997673 to 37997706 33 + TSS region transcription start site region 150775
Cpgi9961 18 37998453 to 37998839 386 CpG island CpG island 9961
Tssr153013 18 37998714 to 37998771 57 - TSS region transcription start site region 153013
Tssr153014 18 37999517 to 37999540 23 - TSS region transcription start site region 153014
Gm30093 18 38025003 to 38104400 79397 + lncRNA gene predicted gene, 30093
Cpgi9962 18 38025110 to 38025779 669 CpG island CpG island 9962
Gm41701 18 38049789 to 38061485 11696 - lncRNA gene predicted gene, 41701
Hctq8 18 38084527 to 38084674 147 QTL hematocrit QTL 8
D18Mit94 18 38084527 to 38084674 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 94
Cpgi9963 18 38096292 to 38096540 248 CpG island CpG island 9963
Gm30188 18 38105757 to 38145025 39268 - lncRNA gene predicted gene, 30188
Cpgi9964 18 38144961 to 38145341 380 CpG island CpG island 9964
Gm30142 18 38146242 to 38147998 1756 + lncRNA gene predicted gene, 30142
Tssr153015 18 38150799 to 38150810 11 - TSS region transcription start site region 153015
Gm30259 18 38162664 to 38168039 5375 - lncRNA gene predicted gene, 30259
Gm38566 18 38168484 to 38173421 4937 - lncRNA gene predicted gene, 38566
Cpgi9965 18 38185132 to 38185549 417 CpG island CpG island 9965
Cpgi9966 18 38185608 to 38186244 636 CpG island CpG island 9966
Cpgi9967 18 38189429 to 38189930 501 CpG island CpG island 9967
Pcdh1 18 38189454 to 38212048 22594 - protein coding gene protocadherin 1
Tssr150776 18 38190793 to 38190804 11 + TSS region transcription start site region 150776
Tssr153016 18 38192121 to 38192128 7 - TSS region transcription start site region 153016
Cpgi9968 18 38197802 to 38198103 301 CpG island CpG island 9968
Tssr153017 18 38203784 to 38203795 11 - TSS region transcription start site region 153017
Tssr153018 18 38203798 to 38203828 30 - TSS region transcription start site region 153018
Tssr153019 18 38203833 to 38203836 3 - TSS region transcription start site region 153019
Tssr153020 18 38203842 to 38203851 9 - TSS region transcription start site region 153020