Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:37814511-37914517

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42416 18 36952741 to 37840200 887459 + protein coding gene predicted gene, 42416
Gm38666 18 36967631 to 37841873 874242 + protein coding gene predicted gene, 38666
Gm37013 18 36969916 to 37833296 863380 + protein coding gene predicted gene, 37013
Gm38667 18 36973802 to 37841873 868071 + protein coding gene predicted gene, 38667
Gm37388 18 36975941 to 37833296 857355 + protein coding gene predicted gene, 37388
Pcdhga1 18 37661945 to 37841870 179925 + protein coding gene protocadherin gamma subfamily A, 1
Pcdhga2 18 37669105 to 37841870 172765 + protein coding gene protocadherin gamma subfamily A, 2
Pcdhga3 18 37674335 to 37841873 167538 + protein coding gene protocadherin gamma subfamily A, 3
Pcdhgb1 18 37680458 to 37841870 161412 + protein coding gene protocadherin gamma subfamily B, 1
Pcdhga4 18 37685400 to 37841870 156470 + protein coding gene protocadherin gamma subfamily A, 4
Pcdhgb2 18 37689859 to 37841872 152013 + protein coding gene protocadherin gamma subfamily B, 2
Pcdhga5 18 37694501 to 37841870 147369 + protein coding gene protocadherin gamma subfamily A, 5
Pcdhga6 18 37707229 to 37841870 134641 + protein coding gene protocadherin gamma subfamily A, 6
Pcdhga7 18 37714834 to 37841873 127039 + protein coding gene protocadherin gamma subfamily A, 7
Pcdhgb4 18 37720554 to 37841870 121316 + protein coding gene protocadherin gamma subfamily B, 4
Pcdhga8 18 37725706 to 37841873 116167 + protein coding gene protocadherin gamma subfamily A, 8
Pcdhgb5 18 37731154 to 37841870 110716 + protein coding gene protocadherin gamma subfamily B, 5
Pcdhga9 18 37736936 to 37841863 104927 + protein coding gene protocadherin gamma subfamily A, 9
Pcdhgb6 18 37742094 to 37841873 99779 + protein coding gene protocadherin gamma subfamily B, 6
Pcdhga10 18 37747188 to 37841870 94682 + protein coding gene protocadherin gamma subfamily A, 10
Pcdhgb7 18 37751779 to 37841870 90091 + protein coding gene protocadherin gamma subfamily B, 7
Pcdhga11 18 37755773 to 37841873 86100 + protein coding gene protocadherin gamma subfamily A, 11
Pcdhgb8 18 37761801 to 37841870 80069 + polymorphic pseudogene protocadherin gamma subfamily B, 8
Pcdhga12 18 37765580 to 37841873 76293 + protein coding gene protocadherin gamma subfamily A, 12
Pcdhgc3 18 37806410 to 37841873 35463 + protein coding gene protocadherin gamma subfamily C, 3
Pcdhgc4 18 37815079 to 37841873 26794 + protein coding gene protocadherin gamma subfamily C, 4
Cpgi9953 18 37815153 to 37816311 1158 CpG island CpG island 9953
Tssr150752 18 37815390 to 37815437 47 + TSS region transcription start site region 150752
Tssr150753 18 37815444 to 37815467 23 + TSS region transcription start site region 150753
Tssr150754 18 37819503 to 37819518 15 + TSS region transcription start site region 150754
Tssr150755 18 37819543 to 37819570 27 + TSS region transcription start site region 150755
Pcdhgc5 18 37819546 to 37841873 22327 + protein coding gene protocadherin gamma subfamily C, 5
Tssr150756 18 37821519 to 37821526 7 + TSS region transcription start site region 150756
Tssr150757 18 37821531 to 37821539 8 + TSS region transcription start site region 150757
Cpgi9954 18 37821951 to 37822656 705 CpG island CpG island 9954
Gm38182 18 37823879 to 37840382 16503 + unclassified non-coding RNA gene predicted gene, 38182
Tssr150758 18 37824071 to 37824080 9 + TSS region transcription start site region 150758
Tssr150759 18 37824090 to 37824103 13 + TSS region transcription start site region 150759
Tssr150760 18 37824581 to 37824634 53 + TSS region transcription start site region 150760
Tssr150761 18 37824946 to 37824972 26 + TSS region transcription start site region 150761
Tssr150762 18 37825003 to 37825056 53 + TSS region transcription start site region 150762
Tssr150763 18 37826700 to 37826707 7 + TSS region transcription start site region 150763
Tssr150764 18 37826717 to 37826734 17 + TSS region transcription start site region 150764
Gm29994 18 37829008 to 37830200 1192 - antisense lncRNA gene predicted gene, 29994
Tssr152991 18 37830090 to 37830102 12 - TSS region transcription start site region 152991
Tssr150765 18 37830601 to 37830605 4 + TSS region transcription start site region 150765
Cpgi9955 18 37839889 to 37840070 181 CpG island CpG island 9955
Cpgi9956 18 37841578 to 37841796 218 CpG island CpG island 9956
Diaph1 18 37843601 to 37935476 91875 - protein coding gene diaphanous related formin 1
Mir6979 18 37854605 to 37854660 55 - miRNA gene microRNA 6979
Tssr152992 18 37864511 to 37864517 6 - TSS region transcription start site region 152992
Tssr5290 18 37873254 to 37873255 1 + TSS region transcription start site region 5290
Tssr152993 18 37874347 to 37874380 33 - TSS region transcription start site region 152993
Tssr150766 18 37874547 to 37874550 3 + TSS region transcription start site region 150766
Tssr152994 18 37877760 to 37877772 12 - TSS region transcription start site region 152994
Tssr152995 18 37887954 to 37887956 2 - TSS region transcription start site region 152995
Tssr150767 18 37890899 to 37890923 24 + TSS region transcription start site region 150767
Tssr152996 18 37890983 to 37891000 17 - TSS region transcription start site region 152996
Tssr152997 18 37893373 to 37893411 38 - TSS region transcription start site region 152997
Tssr152998 18 37894201 to 37894214 13 - TSS region transcription start site region 152998
Tssr152999 18 37896141 to 37896155 14 - TSS region transcription start site region 152999