Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:37773045-37843119

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42416 18 36952741 to 37840200 887459 + protein coding gene predicted gene, 42416
Gm38666 18 36967631 to 37841873 874242 + protein coding gene predicted gene, 38666
Gm37013 18 36969916 to 37833296 863380 + protein coding gene predicted gene, 37013
Gm38667 18 36973802 to 37841873 868071 + protein coding gene predicted gene, 38667
Gm37388 18 36975941 to 37833296 857355 + protein coding gene predicted gene, 37388
Pcdhga1 18 37661945 to 37841870 179925 + protein coding gene protocadherin gamma subfamily A, 1
Pcdhga2 18 37669105 to 37841870 172765 + protein coding gene protocadherin gamma subfamily A, 2
Pcdhga3 18 37674335 to 37841873 167538 + protein coding gene protocadherin gamma subfamily A, 3
Pcdhgb1 18 37680458 to 37841870 161412 + protein coding gene protocadherin gamma subfamily B, 1
Pcdhga4 18 37685400 to 37841870 156470 + protein coding gene protocadherin gamma subfamily A, 4
Pcdhgb2 18 37689859 to 37841872 152013 + protein coding gene protocadherin gamma subfamily B, 2
Pcdhga5 18 37694501 to 37841870 147369 + protein coding gene protocadherin gamma subfamily A, 5
Pcdhga6 18 37707229 to 37841870 134641 + protein coding gene protocadherin gamma subfamily A, 6
Pcdhga7 18 37714834 to 37841873 127039 + protein coding gene protocadherin gamma subfamily A, 7
Pcdhgb4 18 37720554 to 37841870 121316 + protein coding gene protocadherin gamma subfamily B, 4
Pcdhga8 18 37725706 to 37841873 116167 + protein coding gene protocadherin gamma subfamily A, 8
Pcdhgb5 18 37731154 to 37841870 110716 + protein coding gene protocadherin gamma subfamily B, 5
Pcdhga9 18 37736936 to 37841863 104927 + protein coding gene protocadherin gamma subfamily A, 9
Pcdhgb6 18 37742094 to 37841873 99779 + protein coding gene protocadherin gamma subfamily B, 6
Pcdhga10 18 37747188 to 37841870 94682 + protein coding gene protocadherin gamma subfamily A, 10
Pcdhgb7 18 37751779 to 37841870 90091 + protein coding gene protocadherin gamma subfamily B, 7
Pcdhga11 18 37755773 to 37841873 86100 + protein coding gene protocadherin gamma subfamily A, 11
Pcdhgb8 18 37761801 to 37841870 80069 + polymorphic pseudogene protocadherin gamma subfamily B, 8
Pcdhga12 18 37765580 to 37841873 76293 + protein coding gene protocadherin gamma subfamily A, 12
BC037039 18 37805718 to 37807922 2204 - antisense lncRNA gene cDNA sequence BC037039
Cpgi9951 18 37805941 to 37807626 1685 CpG island CpG island 9951
Tssr150739 18 37806389 to 37806453 64 + TSS region transcription start site region 150739
Pcdhgc3 18 37806410 to 37841873 35463 + protein coding gene protocadherin gamma subfamily C, 3
Tssr5287 18 37806469 to 37806472 3 + TSS region transcription start site region 5287
Tssr150740 18 37806491 to 37806496 5 + TSS region transcription start site region 150740
Tssr150741 18 37807010 to 37807023 13 + TSS region transcription start site region 150741
Tssr150742 18 37807038 to 37807091 53 + TSS region transcription start site region 150742
Tssr150743 18 37807840 to 37807861 21 + TSS region transcription start site region 150743
Cpgi9952 18 37807901 to 37808962 1061 CpG island CpG island 9952
Tssr5288 18 37807939 to 37807960 21 - TSS region transcription start site region 5288
Tssr150744 18 37808045 to 37808119 74 + TSS region transcription start site region 150744
Tssr150745 18 37808690 to 37808704 14 + TSS region transcription start site region 150745
Tssr150746 18 37808713 to 37808719 6 + TSS region transcription start site region 150746
Tssr5289 18 37808733 to 37808740 7 + TSS region transcription start site region 5289
Tssr150747 18 37812660 to 37812687 27 + TSS region transcription start site region 150747
Tssr150748 18 37812870 to 37812897 27 + TSS region transcription start site region 150748
Tssr150749 18 37813070 to 37813088 18 + TSS region transcription start site region 150749
Tssr150750 18 37813174 to 37813234 60 + TSS region transcription start site region 150750
Tssr150751 18 37813369 to 37813385 16 + TSS region transcription start site region 150751
Pcdhgc4 18 37815079 to 37841873 26794 + protein coding gene protocadherin gamma subfamily C, 4
Cpgi9953 18 37815153 to 37816311 1158 CpG island CpG island 9953
Tssr150752 18 37815390 to 37815437 47 + TSS region transcription start site region 150752
Tssr150753 18 37815444 to 37815467 23 + TSS region transcription start site region 150753
Tssr150754 18 37819503 to 37819518 15 + TSS region transcription start site region 150754
Tssr150755 18 37819543 to 37819570 27 + TSS region transcription start site region 150755
Pcdhgc5 18 37819546 to 37841873 22327 + protein coding gene protocadherin gamma subfamily C, 5
Tssr150756 18 37821519 to 37821526 7 + TSS region transcription start site region 150756
Tssr150757 18 37821531 to 37821539 8 + TSS region transcription start site region 150757
Cpgi9954 18 37821951 to 37822656 705 CpG island CpG island 9954
Gm38182 18 37823879 to 37840382 16503 + unclassified non-coding RNA gene predicted gene, 38182
Tssr150758 18 37824071 to 37824080 9 + TSS region transcription start site region 150758
Tssr150759 18 37824090 to 37824103 13 + TSS region transcription start site region 150759
Tssr150760 18 37824581 to 37824634 53 + TSS region transcription start site region 150760
Tssr150761 18 37824946 to 37824972 26 + TSS region transcription start site region 150761
Tssr150762 18 37825003 to 37825056 53 + TSS region transcription start site region 150762
Tssr150763 18 37826700 to 37826707 7 + TSS region transcription start site region 150763
Tssr150764 18 37826717 to 37826734 17 + TSS region transcription start site region 150764
Gm29994 18 37829008 to 37830200 1192 - antisense lncRNA gene predicted gene, 29994
Tssr152991 18 37830090 to 37830102 12 - TSS region transcription start site region 152991
Tssr150765 18 37830601 to 37830605 4 + TSS region transcription start site region 150765
Cpgi9955 18 37839889 to 37840070 181 CpG island CpG island 9955
Cpgi9956 18 37841578 to 37841796 218 CpG island CpG island 9956