Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:37553906-37684766

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr152982 18 37618738 to 37618774 36 - TSS region transcription start site region 152982
4930517L18Rik 18 37618906 to 37619766 860 + lincRNA gene RIKEN cDNA 4930517L18 gene
Slc25a2 18 37637378 to 37638723 1345 - protein coding gene solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2
Cpgi9924 18 37638493 to 37638781 288 CpG island CpG island 9924
Tssr152983 18 37638719 to 37638737 18 - TSS region transcription start site region 152983
Taf7 18 37640491 to 37644204 3713 - protein coding gene TATA-box binding protein associated factor 7
Tssr152984 18 37642179 to 37642182 3 - TSS region transcription start site region 152984
Cpgi9925 18 37643894 to 37644436 542 CpG island CpG island 9925
Tssr152985 18 37644062 to 37644073 11 - TSS region transcription start site region 152985
Tssr152986 18 37644121 to 37644136 15 - TSS region transcription start site region 152986
Tssr152987 18 37644137 to 37644178 41 - TSS region transcription start site region 152987
Tssr152988 18 37644185 to 37644209 24 - TSS region transcription start site region 152988
Tssr152989 18 37644215 to 37644226 11 - TSS region transcription start site region 152989
Tssr150712 18 37644316 to 37644345 29 + TSS region transcription start site region 150712
Gm8242 18 37652378 to 37652982 604 - pseudogene predicted gene 8242
Cpgi9926 18 37655512 to 37655981 469 CpG island CpG island 9926
3222401L13Rik 18 37655726 to 37659870 4144 + lincRNA gene RIKEN cDNA 3222401L13 gene
Tssr152990 18 37655838 to 37655858 20 - TSS region transcription start site region 152990
Tssr150713 18 37655891 to 37655915 24 + TSS region transcription start site region 150713
Tssr150714 18 37661771 to 37661776 5 + TSS region transcription start site region 150714
Pcdhga1 18 37661945 to 37841870 179925 + protein coding gene protocadherin gamma subfamily A, 1
Gm37118 18 37661952 to 37662632 680 - antisense lncRNA gene predicted gene, 37118
Cpgi9927 18 37662101 to 37662299 198 CpG island CpG island 9927
Tssr150715 18 37668918 to 37668962 44 + TSS region transcription start site region 150715
Cpgi9928 18 37668985 to 37669861 876 CpG island CpG island 9928
Pcdhga2 18 37669105 to 37841870 172765 + protein coding gene protocadherin gamma subfamily A, 2
Tssr150716 18 37674303 to 37674365 62 + TSS region transcription start site region 150716
Pcdhga3 18 37674335 to 37841873 167538 + protein coding gene protocadherin gamma subfamily A, 3
Cpgi9929 18 37674445 to 37674688 243 CpG island CpG island 9929
Tssr150717 18 37680254 to 37680307 53 + TSS region transcription start site region 150717
Pcdhgb1 18 37680458 to 37841870 161412 + protein coding gene protocadherin gamma subfamily B, 1
Cpgi9930 18 37681708 to 37682079 371 CpG island CpG island 9930