Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:37236744-37446756

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9900 18 37264970 to 37265367 397 CpG island CpG island 9900
Pcdhb1 18 37264998 to 37267454 2456 + protein coding gene protocadherin beta 1
Pcdhb2 18 37294840 to 37297614 2774 + protein coding gene protocadherin beta 2
Cpgi9901 18 37296455 to 37297020 565 CpG island CpG island 9901
Pcdhb3 18 37300799 to 37304585 3786 + protein coding gene protocadherin beta 3
Tssr150694 18 37300810 to 37300835 25 + TSS region transcription start site region 150694
Cpgi9902 18 37302187 to 37303072 885 CpG island CpG island 9902
Gm18529 18 37305535 to 37306532 997 + pseudogene predicted gene, 18529
Tssr150695 18 37307445 to 37307462 17 + TSS region transcription start site region 150695
Pcdhb4 18 37307455 to 37311172 3717 + protein coding gene protocadherin beta 4
Cpgi9903 18 37308982 to 37309724 742 CpG island CpG island 9903
Tssr150696 18 37320374 to 37320401 27 + TSS region transcription start site region 150696
Pcdhb5 18 37320381 to 37323913 3532 + protein coding gene protocadherin beta 5
Cpgi9904 18 37322033 to 37322711 678 CpG island CpG island 9904
Tssr150697 18 37333853 to 37333863 10 + TSS region transcription start site region 150697
Pcdhb6 18 37334028 to 37336346 2318 + protein coding gene protocadherin beta 6
Pcdhb7 18 37341702 to 37345202 3500 + protein coding gene protocadherin beta 7
Tssr150698 18 37341715 to 37341728 13 + TSS region transcription start site region 150698
Tssr150699 18 37341744 to 37341756 12 + TSS region transcription start site region 150699
Cpgi9905 18 37343192 to 37343535 343 CpG island CpG island 9905
Cpgi9906 18 37343794 to 37343974 180 CpG island CpG island 9906
Pcdhb8 18 37355271 to 37357610 2339 + protein coding gene protocadherin beta 8
Cpgi9907 18 37356743 to 37356982 239 CpG island CpG island 9907
Tssr150700 18 37400845 to 37400886 41 + TSS region transcription start site region 150700
Pcdhb9 18 37400855 to 37403909 3054 + protein coding gene protocadherin beta 9
Cpgi9908 18 37402376 to 37403102 726 CpG island CpG island 9908
Tssr150701 18 37404053 to 37404058 5 + TSS region transcription start site region 150701
Pcdhb10 18 37411674 to 37414514 2840 + protein coding gene protocadherin beta 10
Tssr150702 18 37411693 to 37411732 39 + TSS region transcription start site region 150702
Cpgi9909 18 37413338 to 37413627 289 CpG island CpG island 9909
Pcdhb11 18 37421418 to 37425032 3614 + protein coding gene protocadherin beta 11
Tssr150703 18 37421428 to 37421455 27 + TSS region transcription start site region 150703
Cpgi9910 18 37423101 to 37423717 616 CpG island CpG island 9910
Gm37446 18 37433412 to 37437547 4135 - antisense lncRNA gene predicted gene, 37446
Gm20162 18 37434243 to 37435113 870 + pseudogene predicted gene, 20162
Tssr150704 18 37435602 to 37435636 34 + TSS region transcription start site region 150704
Pcdhb12 18 37435621 to 37438654 3033 + protein coding gene protocadherin beta 12
Cpgi9911 18 37437107 to 37437999 892 CpG island CpG island 9911
Pcdhb13 18 37442517 to 37446209 3692 + protein coding gene protocadherin beta 13
Cpgi9912 18 37444024 to 37444652 628 CpG island CpG island 9912