Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:37058714-37228729

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcdha1 18 36930285 to 37187657 257372 + protein coding gene protocadherin alpha 1
Pcdha2 18 36939205 to 37187657 248452 + protein coding gene protocadherin alpha 2
Pcdha3 18 36946207 to 37187657 241450 + protein coding gene protocadherin alpha 3
Pcdha4 18 36952689 to 37187657 234968 + protein coding gene protocadherin alpha 4
Pcdha5 18 36960440 to 37187657 227217 + protein coding gene protocadherin alpha 5
Pcdha6 18 36967756 to 37187657 219901 + protein coding gene protocadherin alpha 6
Pcdha7 18 36973924 to 37187657 213733 + protein coding gene protocadherin alpha 7
Pcdha8 18 36992467 to 37187657 195190 + protein coding gene protocadherin alpha 8
Pcdha9 18 36997880 to 37187657 189777 + protein coding gene protocadherin alpha 9
Pcdha10 18 37005320 to 37187657 182337 + protein coding gene protocadherin alpha 10
Pcdha11 18 37010858 to 37187657 176799 + protein coding gene protocadherin alpha 11
Pcdha12 18 37020230 to 37187657 167427 + protein coding gene protocadherin alpha 12
Gm19035 18 37081499 to 37082457 958 + pseudogene predicted gene, 19035
Cpgi9897 18 37089812 to 37090817 1005 CpG island CpG island 9897
Pcdhac1 18 37090136 to 37187657 97521 + protein coding gene protocadherin alpha subfamily C, 1
C130024J02Rik 18 37121095 to 37124112 3017 unclassified gene RIKEN cDNA C130024J02 gene
Cpgi9898 18 37143285 to 37144828 1543 CpG island CpG island 9898
Tssr150691 18 37143664 to 37143696 32 + TSS region transcription start site region 150691
Tssr150692 18 37143714 to 37143729 15 + TSS region transcription start site region 150692
Pcdhac2 18 37143969 to 37187657 43688 + protein coding gene protocadherin alpha subfamily C, 2
Gm10544 18 37159854 to 37178522 18668 - unclassified non-coding RNA gene predicted gene 10544
Gm38097 18 37172126 to 37172564 438 - antisense lncRNA gene predicted gene, 38097
Tssr152980 18 37178493 to 37178531 38 - TSS region transcription start site region 152980
Tssr152981 18 37178700 to 37178716 16 - TSS region transcription start site region 152981
Tssr150693 18 37186695 to 37186696 1 + TSS region transcription start site region 150693
Cpgi9899 18 37218217 to 37218462 245 CpG island CpG island 9899