Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:36851296-37021319

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm6756 18 36920396 to 36922015 1619 + pseudogene predicted gene 6756
Pcdha1 18 36930285 to 37187657 257372 + protein coding gene protocadherin alpha 1
Cpgi9880 18 36931414 to 36932549 1135 CpG island CpG island 9880
Gm37751 18 36933952 to 36935149 1197 - antisense lncRNA gene predicted gene, 37751
Tssr150682 18 36936296 to 36936319 23 + TSS region transcription start site region 150682
Tssr150683 18 36939120 to 36939128 8 + TSS region transcription start site region 150683
Tssr150684 18 36939178 to 36939212 34 + TSS region transcription start site region 150684
Pcdha2 18 36939205 to 37187657 248452 + protein coding gene protocadherin alpha 2
Cpgi9881 18 36940384 to 36941513 1129 CpG island CpG island 9881
Tssr150685 18 36946081 to 36946096 15 + TSS region transcription start site region 150685
Pcdha3 18 36946207 to 37187657 241450 + protein coding gene protocadherin alpha 3
Cpgi9882 18 36947425 to 36947608 183 CpG island CpG island 9882
Cpgi9883 18 36947867 to 36948499 632 CpG island CpG island 9883
Tssr150686 18 36952621 to 36952660 39 + TSS region transcription start site region 150686
Gm38225 18 36952651 to 36953043 392 - antisense lncRNA gene predicted gene, 38225
Pcdha4 18 36952689 to 37187657 234968 + protein coding gene protocadherin alpha 4
Gm42416 18 36952741 to 37840200 887459 + protein coding gene predicted gene, 42416
Cpgi9884 18 36953843 to 36955022 1179 CpG island CpG island 9884
Tssr150687 18 36960269 to 36960298 29 + TSS region transcription start site region 150687
Pcdha5 18 36960440 to 37187657 227217 + protein coding gene protocadherin alpha 5
Cpgi9885 18 36961474 to 36962671 1197 CpG island CpG island 9885
Gm37753 18 36967591 to 36968148 557 - antisense lncRNA gene predicted gene, 37753
Tssr150688 18 36967619 to 36967650 31 + TSS region transcription start site region 150688
Gm38666 18 36967631 to 37841873 874242 + protein coding gene predicted gene, 38666
Pcdha6 18 36967756 to 37187657 219901 + protein coding gene protocadherin alpha 6
Cpgi9886 18 36968829 to 36969831 1002 CpG island CpG island 9886
Gm37013 18 36969916 to 37833296 863380 + protein coding gene predicted gene, 37013
Tssr150689 18 36973799 to 36973816 17 + TSS region transcription start site region 150689
Gm38667 18 36973802 to 37841873 868071 + protein coding gene predicted gene, 38667
Pcdha7 18 36973924 to 37187657 213733 + protein coding gene protocadherin alpha 7
Cpgi9887 18 36974977 to 36976271 1294 CpG island CpG island 9887
Gm37388 18 36975941 to 37833296 857355 + protein coding gene predicted gene, 37388
Gm36858 18 36980057 to 36989575 9518 + pseudogene predicted gene, 36858
Pcdha8 18 36992467 to 37187657 195190 + protein coding gene protocadherin alpha 8
Cpgi9888 18 36992608 to 36992892 284 CpG island CpG island 9888
Cpgi9889 18 36993709 to 36994795 1086 CpG island CpG island 9889
Tssr5284 18 36997807 to 36997825 18 + TSS region transcription start site region 5284
Pcdha9 18 36997880 to 37187657 189777 + protein coding gene protocadherin alpha 9
Cpgi9890 18 36998059 to 36998276 217 CpG island CpG island 9890
Cpgi9891 18 36999314 to 37000150 836 CpG island CpG island 9891
Pcdha10 18 37005320 to 37187657 182337 + protein coding gene protocadherin alpha 10
Cpgi9892 18 37006541 to 37007272 731 CpG island CpG island 9892
Gm10545 18 37008868 to 37020679 11811 - antisense lncRNA gene predicted gene 10545
Tssr5285 18 37010705 to 37010720 15 + TSS region transcription start site region 5285
Pcdha11 18 37010858 to 37187657 176799 + protein coding gene protocadherin alpha 11
Cpgi9893 18 37012137 to 37013030 893 CpG island CpG island 9893
Gm18150 18 37014056 to 37014631 575 + pseudogene predicted gene, 18150
Tssr150690 18 37020097 to 37020138 41 + TSS region transcription start site region 150690
Pcdha12 18 37020230 to 37187657 167427 + protein coding gene protocadherin alpha 12
Cpgi9894 18 37020608 to 37020804 196 CpG island CpG island 9894
Cpgi9895 18 37021300 to 37021557 257 CpG island CpG island 9895