Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:36753923-36839660

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ik 18 36744656 to 36757639 12983 + protein coding gene IK cytokine
Cpgi9875 18 36759844 to 36760634 790 CpG island CpG island 9875
Tssr150670 18 36760214 to 36760292 78 + TSS region transcription start site region 150670
Wdr55 18 36760239 to 36763708 3469 + protein coding gene WD repeat domain 55
Dnd1 18 36763671 to 36766214 2543 - protein coding gene DND microRNA-mediated repression inhibitor 1
Cpgi9876 18 36765068 to 36765577 509 CpG island CpG island 9876
Tssr152972 18 36766192 to 36766205 13 - TSS region transcription start site region 152972
Tssr152973 18 36766218 to 36766237 19 - TSS region transcription start site region 152973
Hars 18 36766530 to 36783205 16675 - protein coding gene histidyl-tRNA synthetase
Tssr152974 18 36770184 to 36770196 12 - TSS region transcription start site region 152974
Tssr152975 18 36772322 to 36772346 24 - TSS region transcription start site region 152975
Tssr152976 18 36772371 to 36772385 14 - TSS region transcription start site region 152976
Cpgi9877 18 36782746 to 36783565 819 CpG island CpG island 9877
Tssr152977 18 36783096 to 36783108 12 - TSS region transcription start site region 152977
Tssr152978 18 36783113 to 36783141 28 - TSS region transcription start site region 152978
Tssr152979 18 36783146 to 36783191 45 - TSS region transcription start site region 152979
Hars2 18 36783209 to 36792562 9353 + protein coding gene histidyl-tRNA synthetase 2
Tssr150671 18 36783222 to 36783235 13 + TSS region transcription start site region 150671
Tssr150672 18 36783236 to 36783271 35 + TSS region transcription start site region 150672
Cpgi9878 18 36793734 to 36794319 585 CpG island CpG island 9878
Tssr150673 18 36793832 to 36793849 17 + TSS region transcription start site region 150673
Tssr150674 18 36793918 to 36793937 19 + TSS region transcription start site region 150674
Zmat2 18 36793923 to 36799660 5737 + protein coding gene zinc finger, matrin type 2
Tssr150675 18 36795102 to 36795128 26 + TSS region transcription start site region 150675
Tssr150676 18 36796029 to 36796042 13 + TSS region transcription start site region 150676
Tssr150677 18 36796060 to 36796073 13 + TSS region transcription start site region 150677
Tssr150678 18 36796520 to 36796536 16 + TSS region transcription start site region 150678
Tssr150679 18 36799301 to 36799306 5 + TSS region transcription start site region 150679
Cpgi9879 18 36801488 to 36802024 536 CpG island CpG island 9879
Tssr150680 18 36801826 to 36801842 16 + TSS region transcription start site region 150680
Tssr150681 18 36801856 to 36801882 26 + TSS region transcription start site region 150681
Vaultrc5 18 36801866 to 36802008 142 + lncRNA gene vault RNA component 5
Gm23424 18 36810891 to 36811000 109 + miRNA gene predicted gene, 23424