Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:36634470-36724497

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ankhd1 18 36560603 to 36658908 98305 + protein coding gene ankyrin repeat and KH domain containing 1
Tssr150643 18 36635554 to 36635557 3 + TSS region transcription start site region 150643
Tssr150644 18 36638185 to 36638206 21 + TSS region transcription start site region 150644
Tssr150645 18 36638574 to 36638585 11 + TSS region transcription start site region 150645
Tssr150646 18 36641615 to 36641630 15 + TSS region transcription start site region 150646
Eif4ebp3 18 36664060 to 36665917 1857 + protein coding gene eukaryotic translation initiation factor 4E binding protein 3
Tssr150647 18 36664106 to 36664124 18 + TSS region transcription start site region 150647
Tssr150648 18 36664132 to 36664157 25 + TSS region transcription start site region 150648
Tssr150649 18 36665321 to 36665347 26 + TSS region transcription start site region 150649
Sra1 18 36667187 to 36670311 3124 - protein coding gene steroid receptor RNA activator 1
Cpgi9870 18 36670031 to 36670447 416 CpG island CpG island 9870
Tssr152943 18 36670269 to 36670317 48 - TSS region transcription start site region 152943
Apbb3 18 36671154 to 36679366 8212 - protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 3
5830431N17Rik 18 36671971 to 36672468 497 unclassified gene RIKEN cDNA 5830431N17 gene
Tssr152944 18 36678269 to 36678273 4 - TSS region transcription start site region 152944
Cpgi9871 18 36678886 to 36679654 768 CpG island CpG island 9871
Tssr152945 18 36679111 to 36679135 24 - TSS region transcription start site region 152945
Tssr152946 18 36679141 to 36679168 27 - TSS region transcription start site region 152946
Tssr150650 18 36679193 to 36679253 60 + TSS region transcription start site region 150650
Slc35a4 18 36679215 to 36683861 4646 + protein coding gene solute carrier family 35, member A4
Tssr152947 18 36679227 to 36679250 23 - TSS region transcription start site region 152947
Tssr152948 18 36679258 to 36679279 21 - TSS region transcription start site region 152948
Tssr152949 18 36679285 to 36679349 64 - TSS region transcription start site region 152949
Tssr152950 18 36679353 to 36679380 27 - TSS region transcription start site region 152950
Tssr152951 18 36679423 to 36679438 15 - TSS region transcription start site region 152951
Tssr152952 18 36679470 to 36679497 27 - TSS region transcription start site region 152952
Tssr150651 18 36679575 to 36679592 17 + TSS region transcription start site region 150651
E230025N22Rik 18 36684923 to 36695925 11002 - protein coding gene Riken cDNA E230025N22 gene
Tssr152953 18 36700542 to 36700574 32 - TSS region transcription start site region 152953
Tssr150652 18 36702433 to 36702452 19 + TSS region transcription start site region 150652
Gm41699 18 36709020 to 36718962 9942 + lncRNA gene predicted gene, 41699
Tssr150653 18 36709206 to 36709224 18 + TSS region transcription start site region 150653
Tssr150654 18 36709229 to 36709240 11 + TSS region transcription start site region 150654
Tssr152954 18 36713359 to 36713363 4 - TSS region transcription start site region 152954
Tssr150655 18 36713669 to 36713718 49 + TSS region transcription start site region 150655
Tssr5283 18 36719953 to 36719960 7 - TSS region transcription start site region 5283
Tssr152955 18 36720021 to 36720026 5 - TSS region transcription start site region 152955
Tssr150656 18 36720216 to 36720239 23 + TSS region transcription start site region 150656