MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:36379523-36529535

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cystm1	18	36348624 to 36393370	44746	+	protein coding gene	cysteine-rich transmembrane module containing 1
Tssr150627	18	36390922 to 36390926	4	+	TSS region	transcription start site region 150627
Pfdn1	18	36403679 to 36454495	50816	-	protein coding gene	prefoldin 1
Tssr152932	18	36416593 to 36416598	5	-	TSS region	transcription start site region 152932
Tssr152933	18	36453830 to 36453835	5	-	TSS region	transcription start site region 152933
Tssr152934	18	36454487 to 36454516	29	-	TSS region	transcription start site region 152934
Tssr152935	18	36454523 to 36454535	12	-	TSS region	transcription start site region 152935
Hbegf	18	36504929 to 36515805	10876	-	protein coding gene	heparin-binding EGF-like growth factor
Cpgi9868	18	36515063 to 36516264	1201		CpG island	CpG island 9868
Tssr152936	18	36515767 to 36515787	20	-	TSS region	transcription start site region 152936
Tssr152937	18	36515798 to 36515812	14	-	TSS region	transcription start site region 152937
Gm41698	18	36515946 to 36519145	3199	+	lncRNA gene	predicted gene, 41698
Tssr150628	18	36528145 to 36528154	9	+	TSS region	transcription start site region 150628
Slc4a9	18	36528157 to 36541293	13136	+	protein coding gene	solute carrier family 4, sodium bicarbonate cotransporter, member 9
Tssr150629	18	36529205 to 36529208	3	+	TSS region	transcription start site region 150629
Tssr150630	18	36529223 to 36529241	18	+	TSS region	transcription start site region 150630
Tssr150631	18	36529243 to 36529251	8	+	TSS region	transcription start site region 150631