Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:34706895-34893484

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gfra3 18 34689903 to 34720387 30484 - protein coding gene glial cell line derived neurotrophic factor family receptor alpha 3
Cpgi9825 18 34720001 to 34720585 584 CpG island CpG island 9825
Tssr152824 18 34720245 to 34720262 17 - TSS region transcription start site region 152824
Tssr152825 18 34720269 to 34720311 42 - TSS region transcription start site region 152825
Cdc25c 18 34732997 to 34751533 18536 - protein coding gene cell division cycle 25C
Gm3550 18 34737368 to 34738014 646 + pseudogene predicted gene 3550
Tssr152826 18 34746889 to 34746890 1 - TSS region transcription start site region 152826
Cpgi9826 18 34751251 to 34752334 1083 CpG island CpG island 9826
Tssr152827 18 34751345 to 34751357 12 - TSS region transcription start site region 152827
Tssr152828 18 34751502 to 34751541 39 - TSS region transcription start site region 152828
Tssr152829 18 34751542 to 34751560 18 - TSS region transcription start site region 152829
Tssr150470 18 34751771 to 34751786 15 + TSS region transcription start site region 150470
Tssr150471 18 34751803 to 34751818 15 + TSS region transcription start site region 150471
2010110K18Rik 18 34753443 to 34758694 5251 + lincRNA gene RIKEN cDNA 2010110K18 gene
Tssr150472 18 34758853 to 34758879 26 + TSS region transcription start site region 150472
Tssr150473 18 34758890 to 34758897 7 + TSS region transcription start site region 150473
Fam53c 18 34758906 to 34773760 14854 + protein coding gene family with sequence similarity 53, member C
Gm3561 18 34758945 to 34761890 2945 - protein coding gene predicted gene 3561
Tssr150474 18 34759100 to 34759112 12 + TSS region transcription start site region 150474
Cpgi9827 18 34759247 to 34759994 747 CpG island CpG island 9827
Tssr150475 18 34759551 to 34759558 7 + TSS region transcription start site region 150475
Tssr150476 18 34762634 to 34762643 9 + TSS region transcription start site region 150476
Tssr150477 18 34768278 to 34768287 9 + TSS region transcription start site region 150477
Tssr150478 18 34776203 to 34776207 4 + TSS region transcription start site region 150478
Cpgi9828 18 34776411 to 34777830 1419 CpG island CpG island 9828
Tssr150479 18 34777012 to 34777075 63 + TSS region transcription start site region 150479
Kdm3b 18 34777047 to 34838660 61613 + protein coding gene KDM3B lysine (K)-specific demethylase 3B
Tssr150480 18 34777590 to 34777646 56 + TSS region transcription start site region 150480
Tssr150481 18 34777847 to 34777863 16 + TSS region transcription start site region 150481
Gm26538 18 34796895 to 34803484 6589 - lincRNA gene predicted gene, 26538
Cpgi9829 18 34840391 to 34840875 484 CpG island CpG island 9829
Tssr150482 18 34840575 to 34840586 11 + TSS region transcription start site region 150482
Reep2 18 34840589 to 34847463 6874 + protein coding gene receptor accessory protein 2
Tssr150483 18 34840600 to 34840614 14 + TSS region transcription start site region 150483
Tssr150484 18 34840618 to 34840706 88 + TSS region transcription start site region 150484
Gm41689 18 34849123 to 34850988 1865 + lncRNA gene predicted gene, 41689
D18Mit70 18 34849194 to 34849302 108 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 70
Tssr150485 18 34855562 to 34855601 39 + TSS region transcription start site region 150485
Tssr152830 18 34856222 to 34856241 19 - TSS region transcription start site region 152830
Tssr150486 18 34856531 to 34856545 14 + TSS region transcription start site region 150486
Cpgi9830 18 34859799 to 34862800 3001 CpG island CpG island 9830
Tssr152831 18 34860421 to 34860426 5 - TSS region transcription start site region 152831
Tssr150487 18 34860961 to 34860987 26 + TSS region transcription start site region 150487
Tssr150488 18 34861200 to 34861215 15 + TSS region transcription start site region 150488
Egr1 18 34861207 to 34864956 3749 + protein coding gene early growth response 1
Tssr152832 18 34861427 to 34861441 14 - TSS region transcription start site region 152832
Tssr150489 18 34862470 to 34862481 11 + TSS region transcription start site region 150489
Tssr150490 18 34862496 to 34862521 25 + TSS region transcription start site region 150490
Tssr150491 18 34862524 to 34862570 46 + TSS region transcription start site region 150491
Tssr150492 18 34862596 to 34862616 20 + TSS region transcription start site region 150492
Tssr150493 18 34862673 to 34862698 25 + TSS region transcription start site region 150493
Tssr152833 18 34862707 to 34862721 14 - TSS region transcription start site region 152833
Tssr152834 18 34862766 to 34862814 48 - TSS region transcription start site region 152834
Tssr150494 18 34862929 to 34862965 36 + TSS region transcription start site region 150494
Tssr150495 18 34862983 to 34863019 36 + TSS region transcription start site region 150495
Tssr150496 18 34863056 to 34863088 32 + TSS region transcription start site region 150496
Tssr150497 18 34863248 to 34863259 11 + TSS region transcription start site region 150497
Tssr150498 18 34863360 to 34863376 16 + TSS region transcription start site region 150498
Tssr150499 18 34863494 to 34863505 11 + TSS region transcription start site region 150499
Tssr150500 18 34864350 to 34864361 11 + TSS region transcription start site region 150500
Tssr150501 18 34864655 to 34864665 10 + TSS region transcription start site region 150501
Tssr152835 18 34886663 to 34886668 5 - TSS region transcription start site region 152835
Cpgi9831 18 34887055 to 34887988 933 CpG island CpG island 9831
Tssr152836 18 34887334 to 34887339 5 - TSS region transcription start site region 152836
Tssr152837 18 34887362 to 34887394 32 - TSS region transcription start site region 152837
Tssr150502 18 34887519 to 34887524 5 + TSS region transcription start site region 150502