Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:34696542-34806560

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gfra3 18 34689903 to 34720387 30484 - protein coding gene glial cell line derived neurotrophic factor family receptor alpha 3
Tssr152823 18 34703856 to 34703863 7 - TSS region transcription start site region 152823
Cpgi9825 18 34720001 to 34720585 584 CpG island CpG island 9825
Tssr152824 18 34720245 to 34720262 17 - TSS region transcription start site region 152824
Tssr152825 18 34720269 to 34720311 42 - TSS region transcription start site region 152825
Cdc25c 18 34732997 to 34751533 18536 - protein coding gene cell division cycle 25C
Gm3550 18 34737368 to 34738014 646 + pseudogene predicted gene 3550
Tssr152826 18 34746889 to 34746890 1 - TSS region transcription start site region 152826
Cpgi9826 18 34751251 to 34752334 1083 CpG island CpG island 9826
Tssr152827 18 34751345 to 34751357 12 - TSS region transcription start site region 152827
Tssr152828 18 34751502 to 34751541 39 - TSS region transcription start site region 152828
Tssr152829 18 34751542 to 34751560 18 - TSS region transcription start site region 152829
Tssr150470 18 34751771 to 34751786 15 + TSS region transcription start site region 150470
Tssr150471 18 34751803 to 34751818 15 + TSS region transcription start site region 150471
2010110K18Rik 18 34753443 to 34758694 5251 + lincRNA gene RIKEN cDNA 2010110K18 gene
Tssr150472 18 34758853 to 34758879 26 + TSS region transcription start site region 150472
Tssr150473 18 34758890 to 34758897 7 + TSS region transcription start site region 150473
Fam53c 18 34758906 to 34773760 14854 + protein coding gene family with sequence similarity 53, member C
Gm3561 18 34758945 to 34761890 2945 - protein coding gene predicted gene 3561
Tssr150474 18 34759100 to 34759112 12 + TSS region transcription start site region 150474
Cpgi9827 18 34759247 to 34759994 747 CpG island CpG island 9827
Tssr150475 18 34759551 to 34759558 7 + TSS region transcription start site region 150475
Tssr150476 18 34762634 to 34762643 9 + TSS region transcription start site region 150476
Tssr150477 18 34768278 to 34768287 9 + TSS region transcription start site region 150477
Tssr150478 18 34776203 to 34776207 4 + TSS region transcription start site region 150478
Cpgi9828 18 34776411 to 34777830 1419 CpG island CpG island 9828
Tssr150479 18 34777012 to 34777075 63 + TSS region transcription start site region 150479
Kdm3b 18 34777047 to 34838660 61613 + protein coding gene KDM3B lysine (K)-specific demethylase 3B
Tssr150480 18 34777590 to 34777646 56 + TSS region transcription start site region 150480
Tssr150481 18 34777847 to 34777863 16 + TSS region transcription start site region 150481
Gm26538 18 34796895 to 34803484 6589 - lincRNA gene predicted gene, 26538