Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:34646889-34846890

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdc23 18 34630951 to 34651735 20784 - protein coding gene CDC23 cell division cycle 23
n-R5s25 18 34647400 to 34647518 118 + rRNA gene nuclear encoded rRNA 5S 25
Cpgi9822 18 34651130 to 34651865 735 CpG island CpG island 9822
Tssr152817 18 34651681 to 34651692 11 - TSS region transcription start site region 152817
Tssr152818 18 34651695 to 34651702 7 - TSS region transcription start site region 152818
Tssr152819 18 34651703 to 34651741 38 - TSS region transcription start site region 152819
Tssr152820 18 34651745 to 34651759 14 - TSS region transcription start site region 152820
Tssr152821 18 34652491 to 34652509 18 - TSS region transcription start site region 152821
D18Mit232 18 34667851 to 34667940 89 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 232
Cpgi9823 18 34679636 to 34679902 266 CpG island CpG island 9823
Tssr152822 18 34688815 to 34688819 4 - TSS region transcription start site region 152822
Gfra3 18 34689903 to 34720387 30484 - protein coding gene glial cell line derived neurotrophic factor family receptor alpha 3
Cpgi9824 18 34695581 to 34695851 270 CpG island CpG island 9824
Tssr152823 18 34703856 to 34703863 7 - TSS region transcription start site region 152823
Cpgi9825 18 34720001 to 34720585 584 CpG island CpG island 9825
Tssr152824 18 34720245 to 34720262 17 - TSS region transcription start site region 152824
Tssr152825 18 34720269 to 34720311 42 - TSS region transcription start site region 152825
Cdc25c 18 34732997 to 34751533 18536 - protein coding gene cell division cycle 25C
Gm3550 18 34737368 to 34738014 646 + pseudogene predicted gene 3550
Tssr152826 18 34746889 to 34746890 1 - TSS region transcription start site region 152826
Cpgi9826 18 34751251 to 34752334 1083 CpG island CpG island 9826
Tssr152827 18 34751345 to 34751357 12 - TSS region transcription start site region 152827
Tssr152828 18 34751502 to 34751541 39 - TSS region transcription start site region 152828
Tssr152829 18 34751542 to 34751560 18 - TSS region transcription start site region 152829
Tssr150470 18 34751771 to 34751786 15 + TSS region transcription start site region 150470
Tssr150471 18 34751803 to 34751818 15 + TSS region transcription start site region 150471
2010110K18Rik 18 34753443 to 34758694 5251 + lincRNA gene RIKEN cDNA 2010110K18 gene
Tssr150472 18 34758853 to 34758879 26 + TSS region transcription start site region 150472
Tssr150473 18 34758890 to 34758897 7 + TSS region transcription start site region 150473
Fam53c 18 34758906 to 34773760 14854 + protein coding gene family with sequence similarity 53, member C
Gm3561 18 34758945 to 34761890 2945 - protein coding gene predicted gene 3561
Tssr150474 18 34759100 to 34759112 12 + TSS region transcription start site region 150474
Cpgi9827 18 34759247 to 34759994 747 CpG island CpG island 9827
Tssr150475 18 34759551 to 34759558 7 + TSS region transcription start site region 150475
Tssr150476 18 34762634 to 34762643 9 + TSS region transcription start site region 150476
Tssr150477 18 34768278 to 34768287 9 + TSS region transcription start site region 150477
Tssr150478 18 34776203 to 34776207 4 + TSS region transcription start site region 150478
Cpgi9828 18 34776411 to 34777830 1419 CpG island CpG island 9828
Tssr150479 18 34777012 to 34777075 63 + TSS region transcription start site region 150479
Kdm3b 18 34777047 to 34838660 61613 + protein coding gene KDM3B lysine (K)-specific demethylase 3B
Tssr150480 18 34777590 to 34777646 56 + TSS region transcription start site region 150480
Tssr150481 18 34777847 to 34777863 16 + TSS region transcription start site region 150481
Gm26538 18 34796895 to 34803484 6589 - lincRNA gene predicted gene, 26538
Cpgi9829 18 34840391 to 34840875 484 CpG island CpG island 9829
Tssr150482 18 34840575 to 34840586 11 + TSS region transcription start site region 150482
Reep2 18 34840589 to 34847463 6874 + protein coding gene receptor accessory protein 2
Tssr150483 18 34840600 to 34840614 14 + TSS region transcription start site region 150483
Tssr150484 18 34840618 to 34840706 88 + TSS region transcription start site region 150484