Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:33902839-34325062

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epb41l4a 18 33796327 to 34007206 210879 - protein coding gene erythrocyte membrane protein band 4.1 like 4a
Cpgi9812 18 34005788 to 34007626 1838 CpG island CpG island 9812
Tssr152780 18 34006540 to 34006582 42 - TSS region transcription start site region 152780
Tssr152781 18 34006921 to 34006989 68 - TSS region transcription start site region 152781
Tssr152782 18 34007026 to 34007057 31 - TSS region transcription start site region 152782
Tssr150443 18 34007167 to 34007178 11 + TSS region transcription start site region 150443
Tssr152783 18 34007254 to 34007361 107 - TSS region transcription start site region 152783
Tssr152784 18 34007448 to 34007484 36 - TSS region transcription start site region 152784
Gm22788 18 34024220 to 34024280 60 - snRNA gene predicted gene, 22788
Tssr5273 18 34032454 to 34032483 29 + TSS region transcription start site region 5273
Gm6052 18 34046798 to 34047300 502 + pseudogene predicted gene 6052
Gm24432 18 34093445 to 34093570 125 + snoRNA gene predicted gene, 24432
Gm35718 18 34102839 to 34125062 22223 + lncRNA gene predicted gene, 35718
Gm5238 18 34125249 to 34125710 461 - pseudogene predicted gene 5238
Tssr152785 18 34139345 to 34139351 6 - TSS region transcription start site region 152785
Gm41687 18 34166751 to 34177539 10788 + lncRNA gene predicted gene, 41687
Gm41686 18 34177537 to 34183391 5854 + lncRNA gene predicted gene, 41686
Gm23411 18 34188878 to 34188939 61 - snRNA gene predicted gene, 23411
Gm10548 18 34207775 to 34221772 13997 - pseudogene predicted gene 10548
Cpgi9813 18 34220477 to 34221722 1245 CpG island CpG island 9813
Tssr150444 18 34220890 to 34220931 41 + TSS region transcription start site region 150444
Apc 18 34220924 to 34322189 101265 + protein coding gene APC, WNT signaling pathway regulator
Tssr150445 18 34220954 to 34220976 22 + TSS region transcription start site region 150445
Tssr150446 18 34220978 to 34221020 42 + TSS region transcription start site region 150446
Tssr150447 18 34221108 to 34221120 12 + TSS region transcription start site region 150447
Tssr152786 18 34221633 to 34221659 26 - TSS region transcription start site region 152786
Tssr150448 18 34246123 to 34246128 5 + TSS region transcription start site region 150448
Cpgi9814 18 34247561 to 34247819 258 CpG island CpG island 9814
Tssr150449 18 34247648 to 34247653 5 + TSS region transcription start site region 150449
Tssr150450 18 34247656 to 34247683 27 + TSS region transcription start site region 150450
Tssr150451 18 34247685 to 34247704 19 + TSS region transcription start site region 150451
D18Ertd734e 18 34251854 to 34252103 249 DNA segment DNA segment, Chr 18, ERATO Doi 734, expressed
Tssr150452 18 34312798 to 34312826 28 + TSS region transcription start site region 150452
Tssr150453 18 34313160 to 34313173 13 + TSS region transcription start site region 150453
Tssr150454 18 34313185 to 34313202 17 + TSS region transcription start site region 150454
Tssr150455 18 34315150 to 34315160 10 + TSS region transcription start site region 150455
Tssr150456 18 34315758 to 34315770 12 + TSS region transcription start site region 150456
Tssr150457 18 34316481 to 34316520 39 + TSS region transcription start site region 150457