MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:3376814-3517222

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi9661	18	3382853 to 3383736	883		CpG island	CpG island 9661
Tssr149890	18	3382979 to 3383065	86	+	TSS region	transcription start site region 149890
Cul2	18	3382988 to 3436377	53389	+	protein coding gene	cullin 2
Tssr149891	18	3383223 to 3383263	40	+	TSS region	transcription start site region 149891
Tssr149892	18	3383264 to 3383267	3	+	TSS region	transcription start site region 149892
Gm6235	18	3446814 to 3447222	408	+	pseudogene	predicted gene 6235
Tssr149893	18	3446896 to 3446906	10	+	TSS region	transcription start site region 149893
Tssr149894	18	3447084 to 3447129	45	+	TSS region	transcription start site region 149894
Gm50088	18	3466371 to 3466502	131	-	pseudogene	predicted gene, 50088
G430049J08Rik	18	3471630 to 3474315	2685	+	unclassified gene	RIKEN cDNA G430049J08 gene
Gm50089	18	3484218 to 3485193	975	+	pseudogene	predicted gene, 50089
Cpgi9662	18	3498978 to 3499341	363		CpG island	CpG island 9662
Cpgi9663	18	3507142 to 3508651	1509		CpG island	CpG island 9663
Tssr152309	18	3507810 to 3507817	7	-	TSS region	transcription start site region 152309
Tssr149895	18	3507917 to 3507943	26	+	TSS region	transcription start site region 149895
Tssr149896	18	3507945 to 3507964	19	+	TSS region	transcription start site region 149896
Bambi	18	3507957 to 3516404	8447	+	protein coding gene	BMP and activin membrane-bound inhibitor
Tssr149897	18	3507981 to 3507992	11	+	TSS region	transcription start site region 149897
Tssr149898	18	3508002 to 3508014	12	+	TSS region	transcription start site region 149898