Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:31252808-31632406

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rit2 18 30974314 to 31317128 342814 - protein coding gene Ras-like without CAAX 2
Tssr152697 18 31316902 to 31316911 9 - TSS region transcription start site region 152697
Tssr152698 18 31316915 to 31316926 11 - TSS region transcription start site region 152698
Tssr152699 18 31316959 to 31316970 11 - TSS region transcription start site region 152699
Tssr152700 18 31316982 to 31316991 9 - TSS region transcription start site region 152700
Tssr152701 18 31317001 to 31317041 40 - TSS region transcription start site region 152701
Tssr152702 18 31317043 to 31317128 85 - TSS region transcription start site region 152702
Tssr152703 18 31317138 to 31317149 11 - TSS region transcription start site region 152703
Tssr152704 18 31317279 to 31317307 28 - TSS region transcription start site region 152704
Tssr150345 18 31324469 to 31324476 7 + TSS region transcription start site region 150345
Gm7941 18 31349183 to 31350204 1021 - pseudogene predicted gene 7941
Gm23283 18 31389994 to 31390103 109 - miRNA gene predicted gene, 23283
Gm41681 18 31397610 to 31403371 5761 - lncRNA gene predicted gene, 41681
Gm18886 18 31422248 to 31422929 681 - pseudogene predicted gene, 18886
Syt4 18 31437808 to 31447406 9598 - protein coding gene synaptotagmin IV
Tssr152705 18 31439683 to 31439689 6 - TSS region transcription start site region 152705
Gm26658 18 31440318 to 31449099 8781 + lincRNA gene predicted gene, 26658
Cpgi9787 18 31447272 to 31447497 225 CpG island CpG island 9787
Tssr152706 18 31447327 to 31447328 1 - TSS region transcription start site region 152706
Tssr152707 18 31447348 to 31447376 28 - TSS region transcription start site region 152707
Tssr152708 18 31447383 to 31447407 24 - TSS region transcription start site region 152708
Gm25396 18 31466235 to 31466367 132 - snoRNA gene predicted gene, 25396
Gm5241 18 31519699 to 31520762 1063 - pseudogene predicted gene 5241
Gm38606 18 31556114 to 31571194 15080 - lncRNA gene predicted gene, 38606
Tssr150346 18 31568418 to 31568421 3 + TSS region transcription start site region 150346
Slc25a46 18 31580168 to 31609902 29734 - protein coding gene solute carrier family 25, member 46
Tssr152709 18 31582250 to 31582259 9 - TSS region transcription start site region 152709
Tssr152710 18 31597779 to 31597795 16 - TSS region transcription start site region 152710
Tssr152711 18 31605553 to 31605561 8 - TSS region transcription start site region 152711
Tssr152712 18 31607521 to 31607527 6 - TSS region transcription start site region 152712
Cpgi9788 18 31609274 to 31610209 935 CpG island CpG island 9788
B930094E09Rik 18 31609512 to 31610751 1239 + unclassified gene RIKEN cDNA B930094E09 gene
Tssr152713 18 31609893 to 31609927 34 - TSS region transcription start site region 152713
Tssr152714 18 31610508 to 31610513 5 - TSS region transcription start site region 152714
Tssr152715 18 31610516 to 31610546 30 - TSS region transcription start site region 152715
Tssr150347 18 31619498 to 31619509 11 + TSS region transcription start site region 150347