Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:30991959-31641970

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rit2 18 30974314 to 31317128 342814 - protein coding gene Ras-like without CAAX 2
Tssr152696 18 31243142 to 31243186 44 - TSS region transcription start site region 152696
Tssr152697 18 31316902 to 31316911 9 - TSS region transcription start site region 152697
Tssr152698 18 31316915 to 31316926 11 - TSS region transcription start site region 152698
Tssr152699 18 31316959 to 31316970 11 - TSS region transcription start site region 152699
Tssr152700 18 31316982 to 31316991 9 - TSS region transcription start site region 152700
Tssr152701 18 31317001 to 31317041 40 - TSS region transcription start site region 152701
Tssr152702 18 31317043 to 31317128 85 - TSS region transcription start site region 152702
Tssr152703 18 31317138 to 31317149 11 - TSS region transcription start site region 152703
Tssr152704 18 31317279 to 31317307 28 - TSS region transcription start site region 152704
Tssr150345 18 31324469 to 31324476 7 + TSS region transcription start site region 150345
Gm7941 18 31349183 to 31350204 1021 - pseudogene predicted gene 7941
Gm23283 18 31389994 to 31390103 109 - miRNA gene predicted gene, 23283
Gm41681 18 31397610 to 31403371 5761 - lncRNA gene predicted gene, 41681
Gm18886 18 31422248 to 31422929 681 - pseudogene predicted gene, 18886
Syt4 18 31437808 to 31447406 9598 - protein coding gene synaptotagmin IV
Tssr152705 18 31439683 to 31439689 6 - TSS region transcription start site region 152705
Gm26658 18 31440318 to 31449099 8781 + lincRNA gene predicted gene, 26658
Cpgi9787 18 31447272 to 31447497 225 CpG island CpG island 9787
Tssr152706 18 31447327 to 31447328 1 - TSS region transcription start site region 152706
Tssr152707 18 31447348 to 31447376 28 - TSS region transcription start site region 152707
Tssr152708 18 31447383 to 31447407 24 - TSS region transcription start site region 152708
Gm25396 18 31466235 to 31466367 132 - snoRNA gene predicted gene, 25396
Gm5241 18 31519699 to 31520762 1063 - pseudogene predicted gene 5241
Gm38606 18 31556114 to 31571194 15080 - lncRNA gene predicted gene, 38606
Tssr150346 18 31568418 to 31568421 3 + TSS region transcription start site region 150346
Slc25a46 18 31580168 to 31609902 29734 - protein coding gene solute carrier family 25, member 46
Tssr152709 18 31582250 to 31582259 9 - TSS region transcription start site region 152709
Tssr152710 18 31597779 to 31597795 16 - TSS region transcription start site region 152710
Tssr152711 18 31605553 to 31605561 8 - TSS region transcription start site region 152711
Tssr152712 18 31607521 to 31607527 6 - TSS region transcription start site region 152712
Cpgi9788 18 31609274 to 31610209 935 CpG island CpG island 9788
B930094E09Rik 18 31609512 to 31610751 1239 + unclassified gene RIKEN cDNA B930094E09 gene
Tssr152713 18 31609893 to 31609927 34 - TSS region transcription start site region 152713
Tssr152714 18 31610508 to 31610513 5 - TSS region transcription start site region 152714
Tssr152715 18 31610516 to 31610546 30 - TSS region transcription start site region 152715
Tssr150347 18 31619498 to 31619509 11 + TSS region transcription start site region 150347
3110038A09Rik 18 31633272 to 31633902 630 unclassified gene RIKEN cDNA 3110038A09 gene
Cpgi9789 18 31633837 to 31635455 1618 CpG island CpG island 9789
Tssr150348 18 31634316 to 31634363 47 + TSS region transcription start site region 150348
Tssr150349 18 31634368 to 31634371 3 + TSS region transcription start site region 150349
Sap130 18 31634371 to 31723061 88690 + protein coding gene Sin3A associated protein
Tssr150350 18 31634374 to 31634390 16 + TSS region transcription start site region 150350
Tssr152716 18 31634769 to 31634811 42 - TSS region transcription start site region 152716
Tssr150351 18 31635074 to 31635138 64 + TSS region transcription start site region 150351