Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:2996814-3897222

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr149883 18 3005638 to 3005665 27 + TSS region transcription start site region 149883
Gm50072 18 3015908 to 3016159 251 + pseudogene predicted gene, 50072
Vmn1r-ps151 18 3026901 to 3027802 901 - pseudogene vomeronasal 1 receptor, pseudogene 151
Vmn1r-ps152 18 3080778 to 3081476 698 - pseudogene vomeronasal 1 receptor, pseudogene 152
Gm50073 18 3105167 to 3105396 229 - pseudogene predicted gene, 50073
Vmn1r238 18 3122492 to 3123412 920 - protein coding gene vomeronasal 1 receptor, 238
Gm50074 18 3139032 to 3139305 273 - pseudogene predicted gene, 50074
Gm50075 18 3171447 to 3171932 485 - pseudogene predicted gene, 50075
Crem 18 3266048 to 3337748 71700 - protein coding gene cAMP responsive element modulator
Tssr152287 18 3270755 to 3270799 44 - TSS region transcription start site region 152287
Tssr152288 18 3280813 to 3280824 11 - TSS region transcription start site region 152288
Tssr5235 18 3280950 to 3280951 1 - TSS region transcription start site region 5235
Tssr152289 18 3280997 to 3281015 18 - TSS region transcription start site region 152289
Tssr152290 18 3281017 to 3281030 13 - TSS region transcription start site region 152290
Tssr152291 18 3281036 to 3281106 70 - TSS region transcription start site region 152291
Tssr149884 18 3281234 to 3281249 15 + TSS region transcription start site region 149884
Tssr152292 18 3281576 to 3281582 6 - TSS region transcription start site region 152292
Tssr152293 18 3281727 to 3281742 15 - TSS region transcription start site region 152293
Tssr152294 18 3281752 to 3281778 26 - TSS region transcription start site region 152294
Tssr152295 18 3299487 to 3299515 28 - TSS region transcription start site region 152295
Tssr152296 18 3299517 to 3299523 6 - TSS region transcription start site region 152296
Tssr152297 18 3299537 to 3299567 30 - TSS region transcription start site region 152297
Tssr152298 18 3309752 to 3309789 37 - TSS region transcription start site region 152298
Tssr152299 18 3309878 to 3309916 38 - TSS region transcription start site region 152299
Cpgi9660 18 3336637 to 3338095 1458 CpG island CpG island 9660
Gm6225 18 3336680 to 3366863 30183 + lincRNA gene predicted gene 6225
Tssr149885 18 3336689 to 3336703 14 + TSS region transcription start site region 149885
Tssr149886 18 3336727 to 3336742 15 + TSS region transcription start site region 149886
Tssr152300 18 3337251 to 3337276 25 - TSS region transcription start site region 152300
Tssr152301 18 3337309 to 3337328 19 - TSS region transcription start site region 152301
Tssr152302 18 3337341 to 3337399 58 - TSS region transcription start site region 152302
Tssr152303 18 3337401 to 3337424 23 - TSS region transcription start site region 152303
Tssr152304 18 3337467 to 3337500 33 - TSS region transcription start site region 152304
Tssr152305 18 3337505 to 3337538 33 - TSS region transcription start site region 152305
Tssr152306 18 3337539 to 3337600 61 - TSS region transcription start site region 152306
Tssr152307 18 3337614 to 3337646 32 - TSS region transcription start site region 152307
Tssr152308 18 3337681 to 3337698 17 - TSS region transcription start site region 152308
Tssr149887 18 3337846 to 3337870 24 + TSS region transcription start site region 149887
Tssr149888 18 3337906 to 3337917 11 + TSS region transcription start site region 149888
Tssr149889 18 3338211 to 3338214 3 + TSS region transcription start site region 149889
Cpgi9661 18 3382853 to 3383736 883 CpG island CpG island 9661
Tssr149890 18 3382979 to 3383065 86 + TSS region transcription start site region 149890
Cul2 18 3382988 to 3436377 53389 + protein coding gene cullin 2
Tssr149891 18 3383223 to 3383263 40 + TSS region transcription start site region 149891
Tssr149892 18 3383264 to 3383267 3 + TSS region transcription start site region 149892
Gm6235 18 3446814 to 3447222 408 + pseudogene predicted gene 6235
Tssr149893 18 3446896 to 3446906 10 + TSS region transcription start site region 149893
Tssr149894 18 3447084 to 3447129 45 + TSS region transcription start site region 149894
Gm50088 18 3466371 to 3466502 131 - pseudogene predicted gene, 50088
G430049J08Rik 18 3471630 to 3474315 2685 + unclassified gene RIKEN cDNA G430049J08 gene
Gm50089 18 3484218 to 3485193 975 + pseudogene predicted gene, 50089
Cpgi9662 18 3498978 to 3499341 363 CpG island CpG island 9662
Cpgi9663 18 3507142 to 3508651 1509 CpG island CpG island 9663
Tssr152309 18 3507810 to 3507817 7 - TSS region transcription start site region 152309
Tssr149895 18 3507917 to 3507943 26 + TSS region transcription start site region 149895
Tssr149896 18 3507945 to 3507964 19 + TSS region transcription start site region 149896
Bambi 18 3507957 to 3516404 8447 + protein coding gene BMP and activin membrane-bound inhibitor
Tssr149897 18 3507981 to 3507992 11 + TSS region transcription start site region 149897
Tssr149898 18 3508002 to 3508014 12 + TSS region transcription start site region 149898
Tssr5236 18 3531896 to 3531902 6 + TSS region transcription start site region 5236
Tssr149899 18 3542487 to 3542504 17 + TSS region transcription start site region 149899
Gm50090 18 3558675 to 3560037 1362 + pseudogene predicted gene, 50090
Gm50091 18 3616281 to 3618242 1961 + unclassified gene predicted gene, 50091
Cpgi9664 18 3638878 to 3639145 267 CpG island CpG island 9664
D18Mit65 18 3729005 to 3729146 141 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 65
Gm23643 18 3770741 to 3770804 63 - snRNA gene predicted gene, 23643
D18Mit66 18 3840944 to 3841103 159 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 66
Rpl7a-ps6 18 3857769 to 3858580 811 - pseudogene ribosomal protein L7A, pseudogene 6
Gm24632 18 3860108 to 3860430 322 + unclassified non-coding RNA gene predicted gene, 24632
Cpgi9665 18 3864092 to 3864357 265 CpG island CpG island 9665