Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:27645164-29913176

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D18Mit62 18 27653324 to 27653478 154 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 62
Gm49978 18 27688151 to 27706672 18521 - lincRNA gene predicted gene, 49978
Tssr5263 18 27705572 to 27705573 1 + TSS region transcription start site region 5263
Tssr150337 18 27745614 to 27745619 5 + TSS region transcription start site region 150337
Gm33674 18 27809732 to 27827685 17953 + lncRNA gene predicted gene, 33674
Gm33805 18 28029775 to 28033519 3744 - lncRNA gene predicted gene, 33805
Gm33860 18 28070140 to 28161660 91520 - lncRNA gene predicted gene, 33860
Cpgi9784 18 28077642 to 28077962 320 CpG island CpG island 9784
Gm5064 18 28187110 to 28188817 1707 - pseudogene predicted gene 5064
Tssr150338 18 28189064 to 28189086 22 + TSS region transcription start site region 150338
Gm24246 18 28309760 to 28309891 131 + snoRNA gene predicted gene, 24246
Tssr150339 18 28381304 to 28381307 3 + TSS region transcription start site region 150339
Gm6643 18 28432889 to 28435355 2466 + pseudogene predicted gene 6643
D18Mit95 18 28452059 to 28452170 111 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 95
Gm34658 18 28534009 to 28534370 361 - pseudogene predicted gene, 34658
4930474G06Rik 18 28560164 to 28998176 438012 + lncRNA gene RIKEN cDNA 4930474G06 gene
Gm20096 18 28602648 to 28602989 341 - pseudogene predicted gene, 20096
BC051408 18 28711861 to 28726847 14986 + unclassified gene cDNA sequence BC051408
D18Mit119 18 28785262 to 28785410 148 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 119
Gm33948 18 28872188 to 28924124 51936 + lncRNA gene predicted gene, 33948
Gm34743 18 29245347 to 29246439 1092 + pseudogene predicted gene, 34743
Tssr150340 18 29333414 to 29333426 12 + TSS region transcription start site region 150340
Cpgi9785 18 29344742 to 29344932 190 CpG island CpG island 9785
4930578E11Rik 18 29396716 to 29496416 99700 - lncRNA gene RIKEN cDNA 4930578E11 gene
Tssr150341 18 29442185 to 29442204 19 + TSS region transcription start site region 150341
4930527G23Rik 18 29442200 to 29466107 23907 + lncRNA gene RIKEN cDNA 4930527G23 gene
Tssr152688 18 29496513 to 29496519 6 - TSS region transcription start site region 152688
Tssr152689 18 29496545 to 29496555 10 - TSS region transcription start site region 152689
Tssr152690 18 29496561 to 29496576 15 - TSS region transcription start site region 152690
Gm34136 18 29529886 to 29539725 9839 - lncRNA gene predicted gene, 34136
Gm34182 18 29633695 to 29639805 6110 - lncRNA gene predicted gene, 34182
Gm7917 18 29657054 to 29657596 542 - pseudogene predicted gene 7917
D18Mit86 18 29660341 to 29660534 193 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 86
Tssr5264 18 29733686 to 29733691 5 + TSS region transcription start site region 5264
D18Mit175 18 29746671 to 29746785 114 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 175
Gm41680 18 29759854 to 29774606 14752 - lncRNA gene predicted gene, 41680
Tssr5265 18 29785897 to 29785898 1 - TSS region transcription start site region 5265
D18Mit233 18 29801485 to 29801606 121 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 233