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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:25103256-26403273

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fhod3 18 24708623 to 25133501 424878 + protein coding gene formin homology 2 domain containing 3
Tpgs2 18 25127223 to 25169007 41784 - protein coding gene tubulin polyglutamylase complex subunit 2
Cpgi9775 18 25168199 to 25169466 1267 CpG island CpG island 9775
Tssr152662 18 25168615 to 25168731 116 - TSS region transcription start site region 152662
Tssr150325 18 25168616 to 25168627 11 + TSS region transcription start site region 150325
Tssr152663 18 25168862 to 25168884 22 - TSS region transcription start site region 152663
Tssr152664 18 25168886 to 25168921 35 - TSS region transcription start site region 152664
Tssr150326 18 25168993 to 25169029 36 + TSS region transcription start site region 150326
AW554918 18 25168999 to 25467321 298322 + protein coding gene expressed sequence AW554918
Tssr152665 18 25169013 to 25169048 35 - TSS region transcription start site region 152665
Tssr5262 18 25194956 to 25194998 42 + TSS region transcription start site region 5262
Gm41678 18 25204973 to 25285525 80552 + lncRNA gene predicted gene, 41678
Tssr150327 18 25234285 to 25234295 10 + TSS region transcription start site region 150327
Tssr150328 18 25234301 to 25234316 15 + TSS region transcription start site region 150328
Tssr150329 18 25234318 to 25234319 1 + TSS region transcription start site region 150329
Gm16558 18 25391801 to 25392332 531 + pseudogene predicted gene 16558
Tssr152666 18 25422027 to 25422029 2 - TSS region transcription start site region 152666
Celf4 18 25477632 to 25754157 276525 - protein coding gene CUGBP, Elav-like family member 4
Tssr152667 18 25477919 to 25477930 11 - TSS region transcription start site region 152667
Cpgi9776 18 25478407 to 25478655 248 CpG island CpG island 9776
Tssr152668 18 25478996 to 25478999 3 - TSS region transcription start site region 152668
Tssr152669 18 25479304 to 25479315 11 - TSS region transcription start site region 152669
Tssr152670 18 25479511 to 25479522 11 - TSS region transcription start site region 152670
Cpgi9777 18 25486512 to 25487578 1066 CpG island CpG island 9777
Tssr152671 18 25486970 to 25487050 80 - TSS region transcription start site region 152671
Cpgi9778 18 25504528 to 25505494 966 CpG island CpG island 9778
Gm32825 18 25505028 to 25508052 3024 + lncRNA gene predicted gene, 32825
Tssr152672 18 25505051 to 25505077 26 - TSS region transcription start site region 152672
Tssr150330 18 25568135 to 25568142 7 + TSS region transcription start site region 150330
Cpgi9779 18 25590236 to 25590549 313 CpG island CpG island 9779
5330430C04Rik 18 25591304 to 25592722 1418 unclassified gene RIKEN cDNA 5330430C04 gene
Gm3227 18 25597490 to 25603833 6343 + antisense lncRNA gene predicted gene 3227
Gm25845 18 25598145 to 25598454 309 - unclassified non-coding RNA gene predicted gene, 25845
Cpgi9780 18 25621889 to 25622194 305 CpG island CpG island 9780
D18Mit69 18 25642713 to 25642859 146 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 69
D18Mit224 18 25652688 to 25652812 124 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 224
Cpgi9781 18 25678752 to 25679806 1054 CpG island CpG island 9781
Tssr152673 18 25679453 to 25679501 48 - TSS region transcription start site region 152673
Tssr152674 18 25679510 to 25679534 24 - TSS region transcription start site region 152674
Tssr152675 18 25679580 to 25679589 9 - TSS region transcription start site region 152675
Tssr152676 18 25679673 to 25679688 15 - TSS region transcription start site region 152676
Tssr152677 18 25680191 to 25680203 12 - TSS region transcription start site region 152677
Tssr152678 18 25684793 to 25684797 4 - TSS region transcription start site region 152678
0710001A04Rik 18 25713770 to 25719147 5377 + antisense lncRNA gene RIKEN cDNA 0710001A04 gene
Cpgi9782 18 25752916 to 25754688 1772 CpG island CpG island 9782
Tssr150331 18 25753256 to 25753273 17 + TSS region transcription start site region 150331
Tssr152679 18 25753486 to 25753498 12 - TSS region transcription start site region 152679
Tssr152680 18 25753582 to 25753600 18 - TSS region transcription start site region 152680
Tssr152681 18 25753611 to 25753632 21 - TSS region transcription start site region 152681
Tssr152682 18 25753665 to 25753734 69 - TSS region transcription start site region 152682
Tssr152683 18 25753852 to 25753927 75 - TSS region transcription start site region 152683
Tssr152684 18 25754116 to 25754176 60 - TSS region transcription start site region 152684
Gm32896 18 25754246 to 25779387 25141 + lncRNA gene predicted gene, 32896
Tssr152685 18 25754326 to 25754334 8 - TSS region transcription start site region 152685
Tssr150332 18 25754381 to 25754387 6 + TSS region transcription start site region 150332
Tssr150333 18 25754503 to 25754507 4 + TSS region transcription start site region 150333
Cpgi9783 18 25755002 to 25755616 614 CpG island CpG island 9783
Gm7847 18 25823581 to 25824357 776 - pseudogene predicted gene 7847
Tssr150334 18 25839101 to 25839115 14 + TSS region transcription start site region 150334
Gm33228 18 26007557 to 26215653 208096 + lncRNA gene predicted gene, 33228
D18Mit147 18 26267914 to 26268063 149 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 147
D18Mit147.1 18 26268043 to 26268177 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 147.1
Gm41679 18 26268359 to 26329872 61513 + lncRNA gene predicted gene, 41679