Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:24779318-25689319

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fhod3 18 24708623 to 25133501 424878 + protein coding gene formin homology 2 domain containing 3
Tssr150314 18 24941408 to 24941429 21 + TSS region transcription start site region 150314
Tssr150315 18 24941457 to 24941466 9 + TSS region transcription start site region 150315
Hrtfm7 18 24953907 to 24954049 142 QTL heart failure modifier 7
D18Mit22 18 24953907 to 24954049 142 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 22
Tssr150316 18 25016047 to 25016084 37 + TSS region transcription start site region 150316
Tssr150317 18 25019185 to 25019189 4 + TSS region transcription start site region 150317
Tssr150318 18 25037072 to 25037074 2 + TSS region transcription start site region 150318
Tssr150319 18 25045040 to 25045046 6 + TSS region transcription start site region 150319
Tssr150320 18 25065669 to 25065697 28 + TSS region transcription start site region 150320
Tssr150321 18 25065805 to 25065820 15 + TSS region transcription start site region 150321
Tssr150322 18 25065840 to 25065851 11 + TSS region transcription start site region 150322
Tssr150323 18 25066080 to 25066092 12 + TSS region transcription start site region 150323
Tssr150324 18 25066123 to 25066136 13 + TSS region transcription start site region 150324
Tpgs2 18 25127223 to 25169007 41784 - protein coding gene tubulin polyglutamylase complex subunit 2
Cpgi9775 18 25168199 to 25169466 1267 CpG island CpG island 9775
Tssr152662 18 25168615 to 25168731 116 - TSS region transcription start site region 152662
Tssr150325 18 25168616 to 25168627 11 + TSS region transcription start site region 150325
Tssr152663 18 25168862 to 25168884 22 - TSS region transcription start site region 152663
Tssr152664 18 25168886 to 25168921 35 - TSS region transcription start site region 152664
Tssr150326 18 25168993 to 25169029 36 + TSS region transcription start site region 150326
AW554918 18 25168999 to 25467321 298322 + protein coding gene expressed sequence AW554918
Tssr152665 18 25169013 to 25169048 35 - TSS region transcription start site region 152665
Tssr5262 18 25194956 to 25194998 42 + TSS region transcription start site region 5262
Gm41678 18 25204973 to 25285525 80552 + lncRNA gene predicted gene, 41678
Tssr150327 18 25234285 to 25234295 10 + TSS region transcription start site region 150327
Tssr150328 18 25234301 to 25234316 15 + TSS region transcription start site region 150328
Tssr150329 18 25234318 to 25234319 1 + TSS region transcription start site region 150329
Gm16558 18 25391801 to 25392332 531 + pseudogene predicted gene 16558
Tssr152666 18 25422027 to 25422029 2 - TSS region transcription start site region 152666
Celf4 18 25477632 to 25754157 276525 - protein coding gene CUGBP, Elav-like family member 4
Tssr152667 18 25477919 to 25477930 11 - TSS region transcription start site region 152667
Cpgi9776 18 25478407 to 25478655 248 CpG island CpG island 9776
Tssr152668 18 25478996 to 25478999 3 - TSS region transcription start site region 152668
Tssr152669 18 25479304 to 25479315 11 - TSS region transcription start site region 152669
Tssr152670 18 25479511 to 25479522 11 - TSS region transcription start site region 152670
Cpgi9777 18 25486512 to 25487578 1066 CpG island CpG island 9777
Tssr152671 18 25486970 to 25487050 80 - TSS region transcription start site region 152671
Cpgi9778 18 25504528 to 25505494 966 CpG island CpG island 9778
Gm32825 18 25505028 to 25508052 3024 + lncRNA gene predicted gene, 32825
Tssr152672 18 25505051 to 25505077 26 - TSS region transcription start site region 152672
Tssr150330 18 25568135 to 25568142 7 + TSS region transcription start site region 150330
Cpgi9779 18 25590236 to 25590549 313 CpG island CpG island 9779
5330430C04Rik 18 25591304 to 25592722 1418 unclassified gene RIKEN cDNA 5330430C04 gene
Gm3227 18 25597490 to 25603833 6343 + antisense lncRNA gene predicted gene 3227
Gm25845 18 25598145 to 25598454 309 - unclassified non-coding RNA gene predicted gene, 25845
Cpgi9780 18 25621889 to 25622194 305 CpG island CpG island 9780
D18Mit69 18 25642713 to 25642859 146 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 69
D18Mit224 18 25652688 to 25652812 124 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 224
Cpgi9781 18 25678752 to 25679806 1054 CpG island CpG island 9781
Tssr152673 18 25679453 to 25679501 48 - TSS region transcription start site region 152673
Tssr152674 18 25679510 to 25679534 24 - TSS region transcription start site region 152674
Tssr152675 18 25679580 to 25679589 9 - TSS region transcription start site region 152675
Tssr152676 18 25679673 to 25679688 15 - TSS region transcription start site region 152676
Tssr152677 18 25680191 to 25680203 12 - TSS region transcription start site region 152677
Tssr152678 18 25684793 to 25684797 4 - TSS region transcription start site region 152678