Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:24249110-24609170

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Galnt1 18 24205344 to 24286816 81472 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 1
Tssr5261 18 24257354 to 24257380 26 + TSS region transcription start site region 5261
Gm7701 18 24257378 to 24258856 1478 + pseudogene predicted gene 7701
Gm38565 18 24289768 to 24315956 26188 + lncRNA gene predicted gene, 38565
Gm38410 18 24339366 to 24344630 5264 + unclassified gene predicted gene, 38410
Cpgi9768 18 24363641 to 24363807 166 CpG island CpG island 9768
D18Mit231 18 24371582 to 24371700 118 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 231
Tssr150292 18 24397421 to 24397424 3 + TSS region transcription start site region 150292
Gm32547 18 24426143 to 24467576 41433 - lncRNA gene predicted gene, 32547
Mir187 18 24429110 to 24429170 60 - miRNA gene microRNA 187
Tssr152652 18 24433507 to 24433510 3 - TSS region transcription start site region 152652
Tssr152653 18 24439101 to 24439106 5 - TSS region transcription start site region 152653
Gm32436 18 24465939 to 24467760 1821 + protein coding gene predicted gene, 32436
Cpgi9769 18 24466847 to 24467842 995 CpG island CpG island 9769
Cpgi9770 18 24470597 to 24471148 551 CpG island CpG island 9770
Tssr150293 18 24470798 to 24470814 16 + TSS region transcription start site region 150293
Tssr150294 18 24470844 to 24470922 78 + TSS region transcription start site region 150294
2700062C07Rik 18 24470871 to 24477767 6896 + protein coding gene RIKEN cDNA 2700062C07 gene
Tssr150295 18 24474917 to 24474923 6 + TSS region transcription start site region 150295
Tssr152654 18 24477196 to 24477203 7 - TSS region transcription start site region 152654
2610028J07Rik 18 24482687 to 24484557 1870 unclassified gene RIKEN cDNA 2610028J07 gene
Rprd1a 18 24484960 to 24530204 45244 - protein coding gene regulation of nuclear pre-mRNA domain containing 1A
Cpgi9771 18 24529367 to 24530416 1049 CpG island CpG island 9771
Tssr152655 18 24530018 to 24530033 15 - TSS region transcription start site region 152655
Tssr152656 18 24530052 to 24530129 77 - TSS region transcription start site region 152656
Tssr152657 18 24530203 to 24530245 42 - TSS region transcription start site region 152657
Gm23606 18 24558602 to 24558722 120 + miRNA gene predicted gene, 23606
Slc39a6 18 24579881 to 24603817 23936 - protein coding gene solute carrier family 39 (metal ion transporter), member 6
Cpgi9772 18 24602900 to 24604341 1441 CpG island CpG island 9772
Tssr152658 18 24603446 to 24603459 13 - TSS region transcription start site region 152658
Tssr152659 18 24603464 to 24603530 66 - TSS region transcription start site region 152659
Tssr150296 18 24603556 to 24603576 20 + TSS region transcription start site region 150296
Tssr152660 18 24603768 to 24603785 17 - TSS region transcription start site region 152660
Tssr152661 18 24603791 to 24603843 52 - TSS region transcription start site region 152661
Elp2 18 24603894 to 24638830 34936 + protein coding gene elongator acetyltransferase complex subunit 2
Tssr150297 18 24603952 to 24603972 20 + TSS region transcription start site region 150297
Tssr150298 18 24603975 to 24603993 18 + TSS region transcription start site region 150298
Tssr150299 18 24606624 to 24606630 6 + TSS region transcription start site region 150299