Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:24178623-25663501

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr152649 18 24178835 to 24178875 40 - TSS region transcription start site region 152649
Tssr152650 18 24178890 to 24178907 17 - TSS region transcription start site region 152650
Cpgi9767 18 24205020 to 24206755 1735 CpG island CpG island 9767
Tssr150283 18 24205303 to 24205348 45 + TSS region transcription start site region 150283
Galnt1 18 24205344 to 24286816 81472 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 1
Tssr150284 18 24205362 to 24205379 17 + TSS region transcription start site region 150284
Tssr150285 18 24205607 to 24205632 25 + TSS region transcription start site region 150285
Tssr150286 18 24205695 to 24205704 9 + TSS region transcription start site region 150286
Tssr150287 18 24205709 to 24205720 11 + TSS region transcription start site region 150287
Tssr150288 18 24205722 to 24205762 40 + TSS region transcription start site region 150288
Tssr152651 18 24205851 to 24205860 9 - TSS region transcription start site region 152651
Tssr150289 18 24205937 to 24206002 65 + TSS region transcription start site region 150289
Tssr150290 18 24206015 to 24206038 23 + TSS region transcription start site region 150290
Tssr150291 18 24238239 to 24238267 28 + TSS region transcription start site region 150291
Tssr5261 18 24257354 to 24257380 26 + TSS region transcription start site region 5261
Gm7701 18 24257378 to 24258856 1478 + pseudogene predicted gene 7701
Gm38565 18 24289768 to 24315956 26188 + lncRNA gene predicted gene, 38565
Gm38410 18 24339366 to 24344630 5264 + unclassified gene predicted gene, 38410
Cpgi9768 18 24363641 to 24363807 166 CpG island CpG island 9768
D18Mit231 18 24371582 to 24371700 118 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 231
Tssr150292 18 24397421 to 24397424 3 + TSS region transcription start site region 150292
Gm32547 18 24426143 to 24467576 41433 - lncRNA gene predicted gene, 32547
Mir187 18 24429110 to 24429170 60 - miRNA gene microRNA 187
Tssr152652 18 24433507 to 24433510 3 - TSS region transcription start site region 152652
Tssr152653 18 24439101 to 24439106 5 - TSS region transcription start site region 152653
Gm32436 18 24465939 to 24467760 1821 + protein coding gene predicted gene, 32436
Cpgi9769 18 24466847 to 24467842 995 CpG island CpG island 9769
Cpgi9770 18 24470597 to 24471148 551 CpG island CpG island 9770
Tssr150293 18 24470798 to 24470814 16 + TSS region transcription start site region 150293
Tssr150294 18 24470844 to 24470922 78 + TSS region transcription start site region 150294
2700062C07Rik 18 24470871 to 24477767 6896 + protein coding gene RIKEN cDNA 2700062C07 gene
Tssr150295 18 24474917 to 24474923 6 + TSS region transcription start site region 150295
Tssr152654 18 24477196 to 24477203 7 - TSS region transcription start site region 152654
2610028J07Rik 18 24482687 to 24484557 1870 unclassified gene RIKEN cDNA 2610028J07 gene
Rprd1a 18 24484960 to 24530204 45244 - protein coding gene regulation of nuclear pre-mRNA domain containing 1A
Cpgi9771 18 24529367 to 24530416 1049 CpG island CpG island 9771
Tssr152655 18 24530018 to 24530033 15 - TSS region transcription start site region 152655
Tssr152656 18 24530052 to 24530129 77 - TSS region transcription start site region 152656
Tssr152657 18 24530203 to 24530245 42 - TSS region transcription start site region 152657
Gm23606 18 24558602 to 24558722 120 + miRNA gene predicted gene, 23606
Slc39a6 18 24579881 to 24603817 23936 - protein coding gene solute carrier family 39 (metal ion transporter), member 6
Cpgi9772 18 24602900 to 24604341 1441 CpG island CpG island 9772
Tssr152658 18 24603446 to 24603459 13 - TSS region transcription start site region 152658
Tssr152659 18 24603464 to 24603530 66 - TSS region transcription start site region 152659
Tssr150296 18 24603556 to 24603576 20 + TSS region transcription start site region 150296
Tssr152660 18 24603768 to 24603785 17 - TSS region transcription start site region 152660
Tssr152661 18 24603791 to 24603843 52 - TSS region transcription start site region 152661
Elp2 18 24603894 to 24638830 34936 + protein coding gene elongator acetyltransferase complex subunit 2
Tssr150297 18 24603952 to 24603972 20 + TSS region transcription start site region 150297
Tssr150298 18 24603975 to 24603993 18 + TSS region transcription start site region 150298
Tssr150299 18 24606624 to 24606630 6 + TSS region transcription start site region 150299
Cpgi9773 18 24653263 to 24654283 1020 CpG island CpG island 9773
Mocos 18 24653691 to 24701575 47884 + protein coding gene molybdenum cofactor sulfurase
Tssr150300 18 24653829 to 24653844 15 + TSS region transcription start site region 150300
Tssr150301 18 24653856 to 24653883 27 + TSS region transcription start site region 150301
Tssr150302 18 24653902 to 24653913 11 + TSS region transcription start site region 150302
n-R5s23 18 24686168 to 24686282 114 - rRNA gene nuclear encoded rRNA 5S 23
Tssr150303 18 24708617 to 24708633 16 + TSS region transcription start site region 150303
Fhod3 18 24708623 to 25133501 424878 + protein coding gene formin homology 2 domain containing 3
Cpgi9774 18 24708885 to 24710479 1594 CpG island CpG island 9774
Gm9955 18 24709040 to 24709348 308 - protein coding gene predicted gene 9955
Tssr150304 18 24709254 to 24709289 35 + TSS region transcription start site region 150304
Tssr150305 18 24709310 to 24709325 15 + TSS region transcription start site region 150305
Tssr150306 18 24709436 to 24709447 11 + TSS region transcription start site region 150306
Tssr150307 18 24709463 to 24709466 3 + TSS region transcription start site region 150307
Tssr150308 18 24709474 to 24709502 28 + TSS region transcription start site region 150308
Tssr150309 18 24709507 to 24709520 13 + TSS region transcription start site region 150309
Tssr150310 18 24710371 to 24710374 3 + TSS region transcription start site region 150310
Tssr150311 18 24746578 to 24746591 13 + TSS region transcription start site region 150311
Tssr150312 18 24746620 to 24746631 11 + TSS region transcription start site region 150312
Tssr150313 18 24746642 to 24746654 12 + TSS region transcription start site region 150313
Gm24294 18 24761163 to 24761439 276 + unclassified non-coding RNA gene predicted gene, 24294
Tssr150314 18 24941408 to 24941429 21 + TSS region transcription start site region 150314
Tssr150315 18 24941457 to 24941466 9 + TSS region transcription start site region 150315
D18Mit22 18 24953907 to 24954049 142 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 22
Hrtfm7 18 24953907 to 24954049 142 QTL heart failure modifier 7
Tssr150316 18 25016047 to 25016084 37 + TSS region transcription start site region 150316
Tssr150317 18 25019185 to 25019189 4 + TSS region transcription start site region 150317
Tssr150318 18 25037072 to 25037074 2 + TSS region transcription start site region 150318
Tssr150319 18 25045040 to 25045046 6 + TSS region transcription start site region 150319
Tssr150320 18 25065669 to 25065697 28 + TSS region transcription start site region 150320
Tssr150321 18 25065805 to 25065820 15 + TSS region transcription start site region 150321
Tssr150322 18 25065840 to 25065851 11 + TSS region transcription start site region 150322
Tssr150323 18 25066080 to 25066092 12 + TSS region transcription start site region 150323
Tssr150324 18 25066123 to 25066136 13 + TSS region transcription start site region 150324
Tpgs2 18 25127223 to 25169007 41784 - protein coding gene tubulin polyglutamylase complex subunit 2
Cpgi9775 18 25168199 to 25169466 1267 CpG island CpG island 9775
Tssr152662 18 25168615 to 25168731 116 - TSS region transcription start site region 152662
Tssr150325 18 25168616 to 25168627 11 + TSS region transcription start site region 150325
Tssr152663 18 25168862 to 25168884 22 - TSS region transcription start site region 152663
Tssr152664 18 25168886 to 25168921 35 - TSS region transcription start site region 152664
Tssr150326 18 25168993 to 25169029 36 + TSS region transcription start site region 150326
AW554918 18 25168999 to 25467321 298322 + protein coding gene expressed sequence AW554918
Tssr152665 18 25169013 to 25169048 35 - TSS region transcription start site region 152665
Tssr5262 18 25194956 to 25194998 42 + TSS region transcription start site region 5262
Gm41678 18 25204973 to 25285525 80552 + lncRNA gene predicted gene, 41678
Tssr150327 18 25234285 to 25234295 10 + TSS region transcription start site region 150327
Tssr150328 18 25234301 to 25234316 15 + TSS region transcription start site region 150328
Tssr150329 18 25234318 to 25234319 1 + TSS region transcription start site region 150329
Gm16558 18 25391801 to 25392332 531 + pseudogene predicted gene 16558
Tssr152666 18 25422027 to 25422029 2 - TSS region transcription start site region 152666
Celf4 18 25477632 to 25754157 276525 - protein coding gene CUGBP, Elav-like family member 4
Tssr152667 18 25477919 to 25477930 11 - TSS region transcription start site region 152667
Cpgi9776 18 25478407 to 25478655 248 CpG island CpG island 9776
Tssr152668 18 25478996 to 25478999 3 - TSS region transcription start site region 152668
Tssr152669 18 25479304 to 25479315 11 - TSS region transcription start site region 152669
Tssr152670 18 25479511 to 25479522 11 - TSS region transcription start site region 152670
Cpgi9777 18 25486512 to 25487578 1066 CpG island CpG island 9777
Tssr152671 18 25486970 to 25487050 80 - TSS region transcription start site region 152671
Cpgi9778 18 25504528 to 25505494 966 CpG island CpG island 9778
Gm32825 18 25505028 to 25508052 3024 + lncRNA gene predicted gene, 32825
Tssr152672 18 25505051 to 25505077 26 - TSS region transcription start site region 152672
Tssr150330 18 25568135 to 25568142 7 + TSS region transcription start site region 150330
Cpgi9779 18 25590236 to 25590549 313 CpG island CpG island 9779
5330430C04Rik 18 25591304 to 25592722 1418 unclassified gene RIKEN cDNA 5330430C04 gene
Gm3227 18 25597490 to 25603833 6343 + antisense lncRNA gene predicted gene 3227
Gm25845 18 25598145 to 25598454 309 - unclassified non-coding RNA gene predicted gene, 25845
Cpgi9780 18 25621889 to 25622194 305 CpG island CpG island 9780
D18Mit69 18 25642713 to 25642859 146 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 69
D18Mit224 18 25652688 to 25652812 124 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 224