Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:23872089-24352108

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mapre2 18 23752333 to 23893861 141528 + protein coding gene microtubule-associated protein, RP/EB family, member 2
Tssr150266 18 23880453 to 23880454 1 + TSS region transcription start site region 150266
Tssr150267 18 23883532 to 23883553 21 + TSS region transcription start site region 150267
Tssr150268 18 23883575 to 23883591 16 + TSS region transcription start site region 150268
Tssr5259 18 23891176 to 23891214 38 + TSS region transcription start site region 5259
Tssr150269 18 23891467 to 23891479 12 + TSS region transcription start site region 150269
Tssr150270 18 23913365 to 23913371 6 + TSS region transcription start site region 150270
Gm38559 18 23916865 to 23928728 11863 + lncRNA gene predicted gene, 38559
Tssr5260 18 23917054 to 23917084 30 + TSS region transcription start site region 5260
Tssr150271 18 23943850 to 23943853 3 + TSS region transcription start site region 150271
Gm46611 18 23943897 to 23944122 225 + pseudogene predicted gene, 46611
Tssr150272 18 23944922 to 23944954 32 + TSS region transcription start site region 150272
Rpl19-ps7 18 23944959 to 23945550 591 + pseudogene ribosomal protein L19, pseudogene 7
Tssr152640 18 23952253 to 23952268 15 - TSS region transcription start site region 152640
Cpgi9761 18 23954285 to 23955313 1028 CpG island CpG island 9761
Tssr152641 18 23954570 to 23954607 37 - TSS region transcription start site region 152641
Tssr150273 18 23954668 to 23954704 36 + TSS region transcription start site region 150273
Zfp397 18 23954692 to 23964673 9981 + protein coding gene zinc finger protein 397
Tssr150274 18 23954706 to 23954717 11 + TSS region transcription start site region 150274
Tssr150275 18 23954848 to 23954873 25 + TSS region transcription start site region 150275
Tssr150276 18 23954876 to 23954922 46 + TSS region transcription start site region 150276
Zscan30 18 23966680 to 23987226 20546 - protein coding gene zinc finger and SCAN domain containing 30
Cpgi9762 18 23986940 to 23987334 394 CpG island CpG island 9762
Tssr152642 18 23987235 to 23987282 47 - TSS region transcription start site region 152642
Cpgi9763 18 23989551 to 23989706 155 CpG island CpG island 9763
Zfp35 18 23989634 to 24005371 15737 + protein coding gene zinc finger protein 35
Tssr150277 18 23989652 to 23989694 42 + TSS region transcription start site region 150277
Tssr150278 18 23999345 to 23999352 7 + TSS region transcription start site region 150278
Zfp24 18 24009702 to 24020810 11108 - protein coding gene zinc finger protein 24
Cpgi9764 18 24020187 to 24021247 1060 CpG island CpG island 9764
Tssr152643 18 24020307 to 24020364 57 - TSS region transcription start site region 152643
Tssr152644 18 24020749 to 24020813 64 - TSS region transcription start site region 152644
Cpgi9765 18 24042932 to 24043124 192 CpG island CpG island 9765
Gm18084 18 24044333 to 24044958 625 - pseudogene predicted gene, 18084
Gm18085 18 24081092 to 24081925 833 - pseudogene predicted gene, 18085
Tssr150279 18 24088988 to 24088992 4 + TSS region transcription start site region 150279
Gm41677 18 24100531 to 24104675 4144 - lncRNA gene predicted gene, 41677
Ino80c 18 24104761 to 24121819 17058 - protein coding gene INO80 complex subunit C
Tssr152645 18 24112042 to 24112076 34 - TSS region transcription start site region 152645
Tssr152646 18 24112077 to 24112087 10 - TSS region transcription start site region 152646
Tssr152647 18 24112089 to 24112108 19 - TSS region transcription start site region 152647
Cpgi9766 18 24121559 to 24122070 511 CpG island CpG island 9766
Tssr150280 18 24121614 to 24121645 31 + TSS region transcription start site region 150280
Tssr152648 18 24121810 to 24121881 71 - TSS region transcription start site region 152648
Tssr150281 18 24154560 to 24154567 7 + TSS region transcription start site region 150281
Tssr150282 18 24168636 to 24168643 7 + TSS region transcription start site region 150282
Tssr152649 18 24178835 to 24178875 40 - TSS region transcription start site region 152649
Tssr152650 18 24178890 to 24178907 17 - TSS region transcription start site region 152650
Cpgi9767 18 24205020 to 24206755 1735 CpG island CpG island 9767
Tssr150283 18 24205303 to 24205348 45 + TSS region transcription start site region 150283
Galnt1 18 24205344 to 24286816 81472 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 1
Tssr150284 18 24205362 to 24205379 17 + TSS region transcription start site region 150284
Tssr150285 18 24205607 to 24205632 25 + TSS region transcription start site region 150285
Tssr150286 18 24205695 to 24205704 9 + TSS region transcription start site region 150286
Tssr150287 18 24205709 to 24205720 11 + TSS region transcription start site region 150287
Tssr150288 18 24205722 to 24205762 40 + TSS region transcription start site region 150288
Tssr152651 18 24205851 to 24205860 9 - TSS region transcription start site region 152651
Tssr150289 18 24205937 to 24206002 65 + TSS region transcription start site region 150289
Tssr150290 18 24206015 to 24206038 23 + TSS region transcription start site region 150290
Tssr150291 18 24238239 to 24238267 28 + TSS region transcription start site region 150291
Tssr5261 18 24257354 to 24257380 26 + TSS region transcription start site region 5261
Gm7701 18 24257378 to 24258856 1478 + pseudogene predicted gene 7701
Gm38565 18 24289768 to 24315956 26188 + lncRNA gene predicted gene, 38565
Gm38410 18 24339366 to 24344630 5264 + unclassified gene predicted gene, 38410