Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:22717588-23987614

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nol4 18 22693181 to 23041653 348472 - protein coding gene nucleolar protein 4
Tssr150241 18 22721607 to 22721612 5 + TSS region transcription start site region 150241
Tssr152627 18 22811713 to 22811718 5 - TSS region transcription start site region 152627
Tssr152628 18 22828517 to 22828521 4 - TSS region transcription start site region 152628
Tssr152629 18 22828538 to 22828551 13 - TSS region transcription start site region 152629
Tssr152630 18 22850738 to 22850759 21 - TSS region transcription start site region 152630
Tssr152631 18 22850780 to 22850795 15 - TSS region transcription start site region 152631
Tssr152632 18 22884252 to 22884256 4 - TSS region transcription start site region 152632
Tssr152633 18 23022829 to 23022841 12 - TSS region transcription start site region 152633
Tssr152634 18 23038658 to 23038676 18 - TSS region transcription start site region 152634
Cpgi9754 18 23038956 to 23040496 1540 CpG island CpG island 9754
Cpgi9755 18 23041086 to 23041918 832 CpG island CpG island 9755
Tssr152635 18 23041553 to 23041566 13 - TSS region transcription start site region 152635
Tssr152636 18 23041611 to 23041622 11 - TSS region transcription start site region 152636
Tssr152637 18 23041641 to 23041671 30 - TSS region transcription start site region 152637
D18Mit93 18 23049162 to 23049307 145 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 93
Gm22495 18 23147094 to 23147219 125 + snoRNA gene predicted gene, 22495
Tssr150242 18 23217122 to 23217125 3 + TSS region transcription start site region 150242
Tssr150243 18 23217175 to 23217186 11 + TSS region transcription start site region 150243
Gm7788 18 23217596 to 23217818 222 + pseudogene predicted gene 7788
Cpgi9756 18 23309910 to 23311161 1251 CpG island CpG island 9756
Tssr150244 18 23310047 to 23310139 92 + TSS region transcription start site region 150244
Tssr150245 18 23310140 to 23310173 33 + TSS region transcription start site region 150245
Tssr150246 18 23310180 to 23310202 22 + TSS region transcription start site region 150246
Tssr150247 18 23333719 to 23333731 12 + TSS region transcription start site region 150247
Tssr150248 18 23352588 to 23352614 26 + TSS region transcription start site region 150248
Tssr150249 18 23352615 to 23352620 5 + TSS region transcription start site region 150249
Tssr150250 18 23395983 to 23395985 2 + TSS region transcription start site region 150250
Dtna 18 23415135 to 23659715 244580 + protein coding gene dystrobrevin alpha
Tssr150251 18 23415162 to 23415215 53 + TSS region transcription start site region 150251
Tssr150252 18 23415400 to 23415454 54 + TSS region transcription start site region 150252
Tssr150253 18 23415484 to 23415492 8 + TSS region transcription start site region 150253
Tssr150254 18 23415568 to 23415583 15 + TSS region transcription start site region 150254
Tssr150255 18 23472279 to 23472280 1 + TSS region transcription start site region 150255
Tssr150256 18 23497498 to 23497544 46 + TSS region transcription start site region 150256
Tssr150257 18 23497548 to 23497608 60 + TSS region transcription start site region 150257
D18Mit172 18 23594669 to 23594774 105 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 172
Gm47898 18 23645326 to 23651837 6511 - antisense lncRNA gene predicted gene, 47898
Tssr5257 18 23715247 to 23715272 25 + TSS region transcription start site region 5257
Gm15972 18 23750447 to 23752305 1858 - antisense lncRNA gene predicted gene 15972
Cpgi9757 18 23752161 to 23753020 859 CpG island CpG island 9757
Mapre2 18 23752333 to 23893861 141528 + protein coding gene microtubule-associated protein, RP/EB family, member 2
Tssr150258 18 23752361 to 23752401 40 + TSS region transcription start site region 150258
Cpgi9758 18 23753256 to 23753453 197 CpG island CpG island 9758
Cpgi9759 18 23753543 to 23753996 453 CpG island CpG island 9759
Tssr150259 18 23753672 to 23753688 16 + TSS region transcription start site region 150259
Tssr150260 18 23753708 to 23753719 11 + TSS region transcription start site region 150260
Tssr150261 18 23753735 to 23753759 24 + TSS region transcription start site region 150261
Tssr150262 18 23771713 to 23771738 25 + TSS region transcription start site region 150262
Mir6360 18 23774864 to 23774989 125 - miRNA gene microRNA 6360
Tssr150263 18 23796839 to 23796840 1 + TSS region transcription start site region 150263
Cpgi9760 18 23803602 to 23804544 942 CpG island CpG island 9760
Tssr150264 18 23803962 to 23804054 92 + TSS region transcription start site region 150264
Tssr5258 18 23805747 to 23805767 20 - TSS region transcription start site region 5258
Tssr152638 18 23805771 to 23805779 8 - TSS region transcription start site region 152638
Gm23207 18 23817270 to 23817371 101 - snRNA gene predicted gene, 23207
Tssr150265 18 23858067 to 23858091 24 + TSS region transcription start site region 150265
Tssr152639 18 23867569 to 23867571 2 - TSS region transcription start site region 152639
Tssr150266 18 23880453 to 23880454 1 + TSS region transcription start site region 150266
Tssr150267 18 23883532 to 23883553 21 + TSS region transcription start site region 150267
Tssr150268 18 23883575 to 23883591 16 + TSS region transcription start site region 150268
Tssr5259 18 23891176 to 23891214 38 + TSS region transcription start site region 5259
Tssr150269 18 23891467 to 23891479 12 + TSS region transcription start site region 150269
Tssr150270 18 23913365 to 23913371 6 + TSS region transcription start site region 150270
Gm38559 18 23916865 to 23928728 11863 + lncRNA gene predicted gene, 38559
Tssr5260 18 23917054 to 23917084 30 + TSS region transcription start site region 5260
Tssr150271 18 23943850 to 23943853 3 + TSS region transcription start site region 150271
Gm46611 18 23943897 to 23944122 225 + pseudogene predicted gene, 46611
Tssr150272 18 23944922 to 23944954 32 + TSS region transcription start site region 150272
Rpl19-ps7 18 23944959 to 23945550 591 + pseudogene ribosomal protein L19, pseudogene 7
Tssr152640 18 23952253 to 23952268 15 - TSS region transcription start site region 152640
Cpgi9761 18 23954285 to 23955313 1028 CpG island CpG island 9761
Tssr152641 18 23954570 to 23954607 37 - TSS region transcription start site region 152641
Tssr150273 18 23954668 to 23954704 36 + TSS region transcription start site region 150273
Zfp397 18 23954692 to 23964673 9981 + protein coding gene zinc finger protein 397
Tssr150274 18 23954706 to 23954717 11 + TSS region transcription start site region 150274
Tssr150275 18 23954848 to 23954873 25 + TSS region transcription start site region 150275
Tssr150276 18 23954876 to 23954922 46 + TSS region transcription start site region 150276
Zscan30 18 23966680 to 23987226 20546 - protein coding gene zinc finger and SCAN domain containing 30
Cpgi9762 18 23986940 to 23987334 394 CpG island CpG island 9762
Tssr152642 18 23987235 to 23987282 47 - TSS region transcription start site region 152642