Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:22151607-23291612

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc178 18 21810897 to 22171396 360499 - protein coding gene coiled coil domain containing 178
Tssr152626 18 22171392 to 22171423 31 - TSS region transcription start site region 152626
Tssr150236 18 22171431 to 22171435 4 + TSS region transcription start site region 150236
Tssr150237 18 22171441 to 22171456 15 + TSS region transcription start site region 150237
4921517O11Rik 18 22171489 to 22173314 1825 unclassified gene RIKEN cDNA 4921517O11 gene
D18Mit27 18 22314612 to 22314751 139 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 27
Tssr150238 18 22318991 to 22318999 8 + TSS region transcription start site region 150238
Gm5968 18 22319065 to 22319928 863 + pseudogene predicted gene 5968
Gm41676 18 22334840 to 22344110 9270 - lncRNA gene predicted gene, 41676
Cpgi9753 18 22343456 to 22345244 1788 CpG island CpG island 9753
Asxl3 18 22344883 to 22530227 185344 + protein coding gene additional sex combs like 3, transcriptional regulator
Tssr150239 18 22344913 to 22344925 12 + TSS region transcription start site region 150239
Tssr150240 18 22643575 to 22643581 6 + TSS region transcription start site region 150240
Nol4 18 22693181 to 23041653 348472 - protein coding gene nucleolar protein 4
Tssr150241 18 22721607 to 22721612 5 + TSS region transcription start site region 150241
Tssr152627 18 22811713 to 22811718 5 - TSS region transcription start site region 152627
Tssr152628 18 22828517 to 22828521 4 - TSS region transcription start site region 152628
Tssr152629 18 22828538 to 22828551 13 - TSS region transcription start site region 152629
Tssr152630 18 22850738 to 22850759 21 - TSS region transcription start site region 152630
Tssr152631 18 22850780 to 22850795 15 - TSS region transcription start site region 152631
Tssr152632 18 22884252 to 22884256 4 - TSS region transcription start site region 152632
Tssr152633 18 23022829 to 23022841 12 - TSS region transcription start site region 152633
Tssr152634 18 23038658 to 23038676 18 - TSS region transcription start site region 152634
Cpgi9754 18 23038956 to 23040496 1540 CpG island CpG island 9754
Cpgi9755 18 23041086 to 23041918 832 CpG island CpG island 9755
Tssr152635 18 23041553 to 23041566 13 - TSS region transcription start site region 152635
Tssr152636 18 23041611 to 23041622 11 - TSS region transcription start site region 152636
Tssr152637 18 23041641 to 23041671 30 - TSS region transcription start site region 152637
D18Mit93 18 23049162 to 23049307 145 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 93
Gm22495 18 23147094 to 23147219 125 + snoRNA gene predicted gene, 22495
Tssr150242 18 23217122 to 23217125 3 + TSS region transcription start site region 150242
Tssr150243 18 23217175 to 23217186 11 + TSS region transcription start site region 150243
Gm7788 18 23217596 to 23217818 222 + pseudogene predicted gene 7788