Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:21366431-22976435

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm22886 18 21380825 to 21380931 106 - snRNA gene predicted gene, 22886
Tssr152619 18 21421989 to 21421993 4 - TSS region transcription start site region 152619
D18Mit68 18 21435625 to 21435737 112 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 68
Otx2m1 18 21435625 to 36054687 14619062 QTL orthodenticle homolog 2 modifier 1
Gm31646 18 21480493 to 21649604 169111 + lncRNA gene predicted gene, 31646
Gm4837 18 21492516 to 21494099 1583 - pseudogene predicted gene 4837
D18Mit111 18 21513305 to 21513420 115 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 111
baw 18 21513305 to 46408598 24895293 heritable phenotypic marker black and white
Idd21.3 18 21513420 to 6108404 -15405016 QTL insulin dependent diabetes susceptibility 21.3
Klhl14 18 21550377 to 21654718 104341 - protein coding gene kelch-like 14
D18Mit82 18 21570676 to 21570810 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 82
Tssr150231 18 21651389 to 21651406 17 + TSS region transcription start site region 150231
Cpgi9751 18 21651413 to 21653258 1845 CpG island CpG island 9751
Tssr150232 18 21651431 to 21651443 12 + TSS region transcription start site region 150232
Tssr150233 18 21651450 to 21651466 16 + TSS region transcription start site region 150233
4930426D05Rik 18 21651565 to 21656107 4542 + antisense lncRNA gene RIKEN cDNA 4930426D05 gene
Tssr152620 18 21651813 to 21651843 30 - TSS region transcription start site region 152620
Tssr152621 18 21651999 to 21652015 16 - TSS region transcription start site region 152621
Tssr152622 18 21652077 to 21652089 12 - TSS region transcription start site region 152622
Tssr152623 18 21652091 to 21652120 29 - TSS region transcription start site region 152623
Tssr152624 18 21652196 to 21652207 11 - TSS region transcription start site region 152624
Tssr150234 18 21652274 to 21652323 49 + TSS region transcription start site region 150234
Tssr152625 18 21652362 to 21652373 11 - TSS region transcription start site region 152625
Tssr150235 18 21653321 to 21653331 10 + TSS region transcription start site region 150235
Cpgi9752 18 21653587 to 21654087 500 CpG island CpG island 9752
Ccdc178 18 21810897 to 22171396 360499 - protein coding gene coiled coil domain containing 178
Tssr152626 18 22171392 to 22171423 31 - TSS region transcription start site region 152626
Tssr150236 18 22171431 to 22171435 4 + TSS region transcription start site region 150236
Tssr150237 18 22171441 to 22171456 15 + TSS region transcription start site region 150237
4921517O11Rik 18 22171489 to 22173314 1825 unclassified gene RIKEN cDNA 4921517O11 gene
D18Mit27 18 22314612 to 22314751 139 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 27
Tssr150238 18 22318991 to 22318999 8 + TSS region transcription start site region 150238
Gm5968 18 22319065 to 22319928 863 + pseudogene predicted gene 5968
Gm41676 18 22334840 to 22344110 9270 - lncRNA gene predicted gene, 41676
Cpgi9753 18 22343456 to 22345244 1788 CpG island CpG island 9753
Asxl3 18 22344883 to 22530227 185344 + protein coding gene additional sex combs like 3, transcriptional regulator
Tssr150239 18 22344913 to 22344925 12 + TSS region transcription start site region 150239
Tssr150240 18 22643575 to 22643581 6 + TSS region transcription start site region 150240
Nol4 18 22693181 to 23041653 348472 - protein coding gene nucleolar protein 4
Tssr150241 18 22721607 to 22721612 5 + TSS region transcription start site region 150241
Tssr152627 18 22811713 to 22811718 5 - TSS region transcription start site region 152627
Tssr152628 18 22828517 to 22828521 4 - TSS region transcription start site region 152628
Tssr152629 18 22828538 to 22828551 13 - TSS region transcription start site region 152629
Tssr152630 18 22850738 to 22850759 21 - TSS region transcription start site region 152630
Tssr152631 18 22850780 to 22850795 15 - TSS region transcription start site region 152631
Tssr152632 18 22884252 to 22884256 4 - TSS region transcription start site region 152632