Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:20971867-21261870

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf125 18 20944625 to 20983862 39237 + protein coding gene ring finger protein 125
C730049O14Rik 18 20985620 to 20987350 1730 unclassified non-coding RNA gene RIKEN cDNA C730049O14 gene
Cpgi9748 18 21001177 to 21002652 1475 CpG island CpG island 9748
Tssr150216 18 21001246 to 21001266 20 + TSS region transcription start site region 150216
Tssr150217 18 21001267 to 21001273 6 + TSS region transcription start site region 150217
Tssr150218 18 21001276 to 21001287 11 + TSS region transcription start site region 150218
Tssr150219 18 21001292 to 21001335 43 + TSS region transcription start site region 150219
Rnf138 18 21001341 to 21028224 26883 + protein coding gene ring finger protein 138
Tssr150220 18 21001353 to 21001358 5 + TSS region transcription start site region 150220
Tssr150221 18 21001472 to 21001491 19 + TSS region transcription start site region 150221
Tssr152612 18 21001528 to 21001546 18 - TSS region transcription start site region 152612
Tssr150222 18 21001766 to 21001777 11 + TSS region transcription start site region 150222
Tssr150223 18 21001778 to 21001789 11 + TSS region transcription start site region 150223
Tssr150224 18 21001794 to 21001810 16 + TSS region transcription start site region 150224
Tssr150225 18 21001819 to 21001829 10 + TSS region transcription start site region 150225
Tssr150226 18 21001877 to 21002012 135 + TSS region transcription start site region 150226
Tssr150227 18 21002026 to 21002035 9 + TSS region transcription start site region 150227
Tssr5256 18 21026304 to 21026308 4 + TSS region transcription start site region 5256
D18Mit173 18 21072016 to 21072134 118 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 173
Tssr150228 18 21072329 to 21072351 22 + TSS region transcription start site region 150228
Mep1b 18 21072344 to 21100199 27855 + protein coding gene meprin 1 beta
Gm6378 18 21076668 to 21077109 441 - pseudogene predicted pseudogene 6378
Tssr150229 18 21091163 to 21091189 26 + TSS region transcription start site region 150229
Tssr150230 18 21093292 to 21093326 34 + TSS region transcription start site region 150230
Tssr152613 18 21116867 to 21116870 3 - TSS region transcription start site region 152613
Garem1 18 21127342 to 21300139 172797 - protein coding gene GRB2 associated regulator of MAPK1 subtype 1
Tssr152614 18 21148919 to 21148921 2 - TSS region transcription start site region 152614
D18Mit132.2 18 21248143 to 21248274 131 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 132.2
D18Mit132 18 21248250 to 21248358 108 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 132