Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:20890620-21082350

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trappc8 18 20817223 to 20896093 78870 - protein coding gene trafficking protein particle complex 8
Cpgi9746 18 20895567 to 20896893 1326 CpG island CpG island 9746
Tssr152608 18 20896342 to 20896400 58 - TSS region transcription start site region 152608
Tssr152609 18 20896410 to 20896421 11 - TSS region transcription start site region 152609
Tssr152610 18 20943762 to 20943807 45 - TSS region transcription start site region 152610
Tssr150198 18 20944607 to 20944625 18 + TSS region transcription start site region 150198
Rnf125 18 20944625 to 20983862 39237 + protein coding gene ring finger protein 125
Tssr152611 18 20945767 to 20945775 8 - TSS region transcription start site region 152611
Cpgi9747 18 20961113 to 20962073 960 CpG island CpG island 9747
Tssr150199 18 20961242 to 20961249 7 + TSS region transcription start site region 150199
Tssr150200 18 20961256 to 20961267 11 + TSS region transcription start site region 150200
Tssr150201 18 20961276 to 20961290 14 + TSS region transcription start site region 150201
Tssr150202 18 20961302 to 20961350 48 + TSS region transcription start site region 150202
Tssr150203 18 20961356 to 20961381 25 + TSS region transcription start site region 150203
Tssr150204 18 20961423 to 20961467 44 + TSS region transcription start site region 150204
Tssr150205 18 20961480 to 20961511 31 + TSS region transcription start site region 150205
Tssr150206 18 20961567 to 20961589 22 + TSS region transcription start site region 150206
Tssr150207 18 20961594 to 20961637 43 + TSS region transcription start site region 150207
Tssr150208 18 20961745 to 20961754 9 + TSS region transcription start site region 150208
Tssr150209 18 20962449 to 20962465 16 + TSS region transcription start site region 150209
Tssr150210 18 20962681 to 20962686 5 + TSS region transcription start site region 150210
Tssr150211 18 20962806 to 20962818 12 + TSS region transcription start site region 150211
Tssr150212 18 20962869 to 20962876 7 + TSS region transcription start site region 150212
Tssr150213 18 20962888 to 20962901 13 + TSS region transcription start site region 150213
Tssr150214 18 20963124 to 20963128 4 + TSS region transcription start site region 150214
D18Ertd232e 18 20967529 to 20967730 201 DNA segment DNA segment, Chr 18, ERATO Doi 232, expressed
Tssr150215 18 20971652 to 20971662 10 + TSS region transcription start site region 150215
C730049O14Rik 18 20985620 to 20987350 1730 unclassified non-coding RNA gene RIKEN cDNA C730049O14 gene
Cpgi9748 18 21001177 to 21002652 1475 CpG island CpG island 9748
Tssr150216 18 21001246 to 21001266 20 + TSS region transcription start site region 150216
Tssr150217 18 21001267 to 21001273 6 + TSS region transcription start site region 150217
Tssr150218 18 21001276 to 21001287 11 + TSS region transcription start site region 150218
Tssr150219 18 21001292 to 21001335 43 + TSS region transcription start site region 150219
Rnf138 18 21001341 to 21028224 26883 + protein coding gene ring finger protein 138
Tssr150220 18 21001353 to 21001358 5 + TSS region transcription start site region 150220
Tssr150221 18 21001472 to 21001491 19 + TSS region transcription start site region 150221
Tssr152612 18 21001528 to 21001546 18 - TSS region transcription start site region 152612
Tssr150222 18 21001766 to 21001777 11 + TSS region transcription start site region 150222
Tssr150223 18 21001778 to 21001789 11 + TSS region transcription start site region 150223
Tssr150224 18 21001794 to 21001810 16 + TSS region transcription start site region 150224
Tssr150225 18 21001819 to 21001829 10 + TSS region transcription start site region 150225
Tssr150226 18 21001877 to 21002012 135 + TSS region transcription start site region 150226
Tssr150227 18 21002026 to 21002035 9 + TSS region transcription start site region 150227
Tssr5256 18 21026304 to 21026308 4 + TSS region transcription start site region 5256
D18Mit173 18 21072016 to 21072134 118 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 173
Tssr150228 18 21072329 to 21072351 22 + TSS region transcription start site region 150228
Mep1b 18 21072344 to 21100199 27855 + protein coding gene meprin 1 beta
Gm6378 18 21076668 to 21077109 441 - pseudogene predicted pseudogene 6378