Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:20532964-20730260

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dsg3 18 20510274 to 20541310 31036 + protein coding gene desmoglein 3
Tpi-rs10 18 20548587 to 20549364 777 - pseudogene triosephosphate isomerase related sequence 10
Tssr152588 18 20549354 to 20549369 15 - TSS region transcription start site region 152588
Tssr150166 18 20556417 to 20556419 2 + TSS region transcription start site region 150166
Gm46630 18 20557533 to 20557978 445 - lncRNA gene predicted gene, 46630
Cpgi9741 18 20557756 to 20558631 875 CpG island CpG island 9741
Tssr150167 18 20558016 to 20558025 9 + TSS region transcription start site region 150167
Tssr150168 18 20558038 to 20558086 48 + TSS region transcription start site region 150168
Dsg2 18 20558074 to 20604521 46447 + protein coding gene desmoglein 2
Tssr150169 18 20558092 to 20558201 109 + TSS region transcription start site region 150169
Tssr150170 18 20558221 to 20558232 11 + TSS region transcription start site region 150170
Tssr150171 18 20558277 to 20558280 3 + TSS region transcription start site region 150171
Cpgi9742 18 20594058 to 20594209 151 CpG island CpG island 9742
Gm16090 18 20597964 to 20665260 67296 - antisense lncRNA gene predicted gene 16090
Cpgi9743 18 20598297 to 20598628 331 CpG island CpG island 9743
Cpgi9744 18 20601373 to 20601686 313 CpG island CpG island 9744
Tssr150172 18 20603351 to 20603364 13 + TSS region transcription start site region 150172
Ttr 18 20665280 to 20674321 9041 + protein coding gene transthyretin
Tssr150173 18 20665403 to 20665420 17 + TSS region transcription start site region 150173
Tssr150174 18 20666443 to 20666474 31 + TSS region transcription start site region 150174
Tssr150175 18 20666480 to 20666517 37 + TSS region transcription start site region 150175
Tssr150176 18 20666540 to 20666551 11 + TSS region transcription start site region 150176
Tssr150177 18 20666552 to 20666567 15 + TSS region transcription start site region 150177
Tssr150178 18 20666703 to 20666714 11 + TSS region transcription start site region 150178
Tssr150179 18 20667401 to 20667406 5 + TSS region transcription start site region 150179
Tssr150180 18 20667616 to 20667627 11 + TSS region transcription start site region 150180
Tssr150181 18 20667710 to 20667721 11 + TSS region transcription start site region 150181
Tssr150182 18 20668926 to 20668928 2 + TSS region transcription start site region 150182
Tssr5254 18 20669971 to 20669972 1 + TSS region transcription start site region 5254
Tssr150183 18 20669975 to 20670045 70 + TSS region transcription start site region 150183
Tssr152589 18 20670044 to 20670074 30 - TSS region transcription start site region 152589
Tssr150184 18 20670048 to 20670067 19 + TSS region transcription start site region 150184
Tssr150185 18 20670070 to 20670098 28 + TSS region transcription start site region 150185
Tssr150186 18 20671548 to 20671564 16 + TSS region transcription start site region 150186
Tssr150187 18 20673626 to 20673697 71 + TSS region transcription start site region 150187
Tssr152590 18 20673684 to 20673693 9 - TSS region transcription start site region 152590
Tssr152591 18 20673695 to 20673770 75 - TSS region transcription start site region 152591
Tssr150188 18 20673698 to 20673721 23 + TSS region transcription start site region 150188
Tssr150189 18 20673752 to 20673801 49 + TSS region transcription start site region 150189
Tssr150190 18 20673804 to 20673821 17 + TSS region transcription start site region 150190
Tssr150191 18 20673831 to 20673867 36 + TSS region transcription start site region 150191
Gm10269 18 20682594 to 20682963 369 - pseudogene predicted gene 10269
Tssr152592 18 20683001 to 20683006 5 - TSS region transcription start site region 152592
B4galt6 18 20684599 to 20746404 61805 - protein coding gene UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6
Tssr152593 18 20694736 to 20694749 13 - TSS region transcription start site region 152593
Tssr152594 18 20703278 to 20703286 8 - TSS region transcription start site region 152594
Gm31437 18 20720150 to 20726003 5853 + lncRNA gene predicted gene, 31437