Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:19836631-20606635

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm24238 18 19856885 to 19856982 97 + rRNA gene predicted gene, 24238
Dsc3 18 19960930 to 20002351 41421 - protein coding gene desmocollin 3
Cpgi9739 18 20001847 to 20002317 470 CpG island CpG island 9739
Tssr152561 18 20002003 to 20002014 11 - TSS region transcription start site region 152561
Tssr152562 18 20002017 to 20002063 46 - TSS region transcription start site region 152562
Tssr152563 18 20002093 to 20002104 11 - TSS region transcription start site region 152563
Tssr152564 18 20002339 to 20002361 22 - TSS region transcription start site region 152564
Tssr152565 18 20002372 to 20002383 11 - TSS region transcription start site region 152565
Dsc2 18 20030633 to 20059554 28921 - protein coding gene desmocollin 2
Cpgi9740 18 20058826 to 20059409 583 CpG island CpG island 9740
Tssr152566 18 20059255 to 20059285 30 - TSS region transcription start site region 152566
Tssr152567 18 20059289 to 20059298 9 - TSS region transcription start site region 152567
Tssr152568 18 20059307 to 20059318 11 - TSS region transcription start site region 152568
Tssr152569 18 20059326 to 20059347 21 - TSS region transcription start site region 152569
Tssr5253 18 20059370 to 20059373 3 - TSS region transcription start site region 5253
Tssr152570 18 20059498 to 20059519 21 - TSS region transcription start site region 152570
Tssr152571 18 20059592 to 20059613 21 - TSS region transcription start site region 152571
Tssr152572 18 20059618 to 20059641 23 - TSS region transcription start site region 152572
Tssr152573 18 20059648 to 20059660 12 - TSS region transcription start site region 152573
Tssr152574 18 20061572 to 20061590 18 - TSS region transcription start site region 152574
Tssr152575 18 20061647 to 20061652 5 - TSS region transcription start site region 152575
Dsc1 18 20084184 to 20114871 30687 - protein coding gene desmocollin 1
Tssr152576 18 20101917 to 20101932 15 - TSS region transcription start site region 152576
Tssr152577 18 20105982 to 20105985 3 - TSS region transcription start site region 152577
Tssr152578 18 20114610 to 20114619 9 - TSS region transcription start site region 152578
Tssr152579 18 20114632 to 20114637 5 - TSS region transcription start site region 152579
Tssr152580 18 20114639 to 20114671 32 - TSS region transcription start site region 152580
Tssr152581 18 20114673 to 20114689 16 - TSS region transcription start site region 152581
Tssr152582 18 20114702 to 20114713 11 - TSS region transcription start site region 152582
Tssr152583 18 20114767 to 20114782 15 - TSS region transcription start site region 152583
Tssr152584 18 20114793 to 20114813 20 - TSS region transcription start site region 152584
Tssr152585 18 20114854 to 20114865 11 - TSS region transcription start site region 152585
Tssr152586 18 20114874 to 20114883 9 - TSS region transcription start site region 152586
Tssr152587 18 20114910 to 20114915 5 - TSS region transcription start site region 152587
D18Mit198 18 20125646 to 20125767 121 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 198
D18Mit117 18 20216028 to 20216167 139 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 117
Tssr150153 18 20221631 to 20221635 4 + TSS region transcription start site region 150153
Dsg1c 18 20247340 to 20285031 37691 + protein coding gene desmoglein 1 gamma
Gm31237 18 20287089 to 20312308 25219 - lncRNA gene predicted gene, 31237
Tssr150154 18 20310738 to 20310757 19 + TSS region transcription start site region 150154
Dsg1a 18 20310873 to 20343353 32480 + protein coding gene desmoglein 1 alpha
Tssr150155 18 20310923 to 20310929 6 + TSS region transcription start site region 150155
Tssr150156 18 20376723 to 20376740 17 + TSS region transcription start site region 150156
Dsg1b 18 20376729 to 20410196 33467 + protein coding gene desmoglein 1 beta
Tssr150157 18 20376839 to 20376846 7 + TSS region transcription start site region 150157
Tssr150158 18 20436012 to 20436043 31 + TSS region transcription start site region 150158
Tssr150159 18 20436169 to 20436183 14 + TSS region transcription start site region 150159
Dsg4 18 20436175 to 20471821 35646 + protein coding gene desmoglein 4
Tssr150160 18 20473244 to 20473245 1 + TSS region transcription start site region 150160
Tssr150161 18 20499209 to 20499216 7 + TSS region transcription start site region 150161
Gm5688 18 20499315 to 20500587 1272 + pseudogene predicted gene 5688
Tssr150162 18 20510223 to 20510234 11 + TSS region transcription start site region 150162
Tssr150163 18 20510253 to 20510267 14 + TSS region transcription start site region 150163
Tssr150164 18 20510269 to 20510290 21 + TSS region transcription start site region 150164
Dsg3 18 20510274 to 20541310 31036 + protein coding gene desmoglein 3
Tssr150165 18 20510291 to 20510301 10 + TSS region transcription start site region 150165
Tpi-rs10 18 20548587 to 20549364 777 - pseudogene triosephosphate isomerase related sequence 10
Tssr152588 18 20549354 to 20549369 15 - TSS region transcription start site region 152588
Tssr150166 18 20556417 to 20556419 2 + TSS region transcription start site region 150166
Gm46630 18 20557533 to 20557978 445 - lncRNA gene predicted gene, 46630
Cpgi9741 18 20557756 to 20558631 875 CpG island CpG island 9741
Tssr150167 18 20558016 to 20558025 9 + TSS region transcription start site region 150167
Tssr150168 18 20558038 to 20558086 48 + TSS region transcription start site region 150168
Dsg2 18 20558074 to 20604521 46447 + protein coding gene desmoglein 2
Tssr150169 18 20558092 to 20558201 109 + TSS region transcription start site region 150169
Tssr150170 18 20558221 to 20558232 11 + TSS region transcription start site region 150170
Tssr150171 18 20558277 to 20558280 3 + TSS region transcription start site region 150171
Cpgi9742 18 20594058 to 20594209 151 CpG island CpG island 9742
Gm16090 18 20597964 to 20665260 67296 - antisense lncRNA gene predicted gene 16090
Cpgi9743 18 20598297 to 20598628 331 CpG island CpG island 9743
Cpgi9744 18 20601373 to 20601686 313 CpG island CpG island 9744
Tssr150172 18 20603351 to 20603364 13 + TSS region transcription start site region 150172