Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:16989560-19209660

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr152558 18 17018975 to 17018985 10 - TSS region transcription start site region 152558
Tssr150151 18 17019062 to 17019093 31 + TSS region transcription start site region 150151
D18Mit171 18 17027136 to 17027245 109 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 171
Gm22470 18 17034662 to 17034791 129 + snoRNA gene predicted gene, 22470
1700001G01Rik 18 17035508 to 17137559 102051 + lincRNA gene RIKEN cDNA 1700001G01 gene
Gm41674 18 17050571 to 17058297 7726 + lncRNA gene predicted gene, 41674
Gm24015 18 17126571 to 17126802 231 - unclassified non-coding RNA gene predicted gene, 24015
4921533I20Rik 18 17234483 to 17235482 999 - pseudogene Riken cDNA 4921533I20 gene
Gm30960 18 17254639 to 17257022 2383 - lncRNA gene predicted gene, 30960
Gm18928 18 17290647 to 17291865 1218 - pseudogene predicted gene, 18928
Gm31018 18 17478967 to 17533929 54962 - lncRNA gene predicted gene, 31018
4930545E07Rik 18 17568746 to 17580990 12244 - lncRNA gene RIKEN cDNA 4930545E07 gene
Gm50082 18 17675864 to 17676119 255 - pseudogene predicted gene, 50082
D18Mit230 18 17692456 to 17692563 107 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 230
D18Mit239 18 17723277 to 17723511 234 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 239
D18Mit157 18 17761117 to 17761251 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 157
D18Mit157.2 18 17761285 to 17761445 160 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 157.2
Tssr150152 18 17773372 to 17773374 2 + TSS region transcription start site region 150152
Tssr152559 18 17784370 to 17784371 1 - TSS region transcription start site region 152559
Gm50083 18 17828819 to 17829020 201 + pseudogene predicted gene, 50083
Tssr152560 18 17829336 to 17829338 2 - TSS region transcription start site region 152560
Cpgi9738 18 17997707 to 17997919 212 CpG island CpG island 9738
Gm26235 18 18099560 to 18099660 100 + miRNA gene predicted gene, 26235
Gm50084 18 18124541 to 18244157 119616 - lincRNA gene predicted gene, 50084
Pwbwq17 18 18132472 to 30437766 12305294 QTL post-weaning body weight QTL 17
Pwbwq18 18 18132472 to 30437766 12305294 QTL post-weaning body weight QTL 18
Ogrq6 18 18132472 to 30437766 12305294 QTL overall growth rate QTL 6
Tssr5252 18 18232271 to 18232277 6 + TSS region transcription start site region 5252
Gm2889 18 18829229 to 18832118 2889 unclassified gene predicted gene 2889
Gm31086 18 19167761 to 19188056 20295 + lncRNA gene predicted gene, 31086