Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:16799062-17239093

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdh2 18 16588877 to 16809246 220369 - protein coding gene cadherin 2
Cpgi9737 18 16806783 to 16809860 3077 CpG island CpG island 9737
Tssr152550 18 16808453 to 16808516 63 - TSS region transcription start site region 152550
Tssr152551 18 16808550 to 16808561 11 - TSS region transcription start site region 152551
Tssr152552 18 16808577 to 16808608 31 - TSS region transcription start site region 152552
Tssr152553 18 16808616 to 16808677 61 - TSS region transcription start site region 152553
Tssr152554 18 16808764 to 16808850 86 - TSS region transcription start site region 152554
Tssr152555 18 16809065 to 16809087 22 - TSS region transcription start site region 152555
Tssr152556 18 16809096 to 16809118 22 - TSS region transcription start site region 152556
Tssr152557 18 16809233 to 16809324 91 - TSS region transcription start site region 152557
Gm15328 18 16816407 to 16822783 6376 + lincRNA gene predicted gene 15328
Gm7670 18 16839317 to 16839957 640 - pseudogene predicted gene 7670
Gm18399 18 16951048 to 16951867 819 - pseudogene predicted gene, 18399
Tssr152558 18 17018975 to 17018985 10 - TSS region transcription start site region 152558
Tssr150151 18 17019062 to 17019093 31 + TSS region transcription start site region 150151
D18Mit171 18 17027136 to 17027245 109 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 171
Gm22470 18 17034662 to 17034791 129 + snoRNA gene predicted gene, 22470
1700001G01Rik 18 17035508 to 17137559 102051 + lincRNA gene RIKEN cDNA 1700001G01 gene
Gm41674 18 17050571 to 17058297 7726 + lncRNA gene predicted gene, 41674
Gm24015 18 17126571 to 17126802 231 - unclassified non-coding RNA gene predicted gene, 24015
4921533I20Rik 18 17234483 to 17235482 999 - pseudogene Riken cDNA 4921533I20 gene