MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:16758577-16858608

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdh2	18	16588877 to 16809246	220369	-	protein coding gene	cadherin 2
Tssr152546	18	16764805 to 16764809	4	-	TSS region	transcription start site region 152546
Tssr152547	18	16766282 to 16766285	3	-	TSS region	transcription start site region 152547
Tssr152548	18	16767961 to 16768010	49	-	TSS region	transcription start site region 152548
Tssr152549	18	16768822 to 16768824	2	-	TSS region	transcription start site region 152549
Mdq3	18	16786338 to 16786338	0		QTL	mammary ductal QTL 3
D18Mit191	18	16794692 to 16794808	116		DNA segment	DNA segment, Chr 18, Massachusetts Institute of Technology 191
Cpgi9737	18	16806783 to 16809860	3077		CpG island	CpG island 9737
Tssr152550	18	16808453 to 16808516	63	-	TSS region	transcription start site region 152550
Tssr152551	18	16808550 to 16808561	11	-	TSS region	transcription start site region 152551
Tssr152552	18	16808577 to 16808608	31	-	TSS region	transcription start site region 152552
Tssr152553	18	16808616 to 16808677	61	-	TSS region	transcription start site region 152553
Tssr152554	18	16808764 to 16808850	86	-	TSS region	transcription start site region 152554
Tssr152555	18	16809065 to 16809087	22	-	TSS region	transcription start site region 152555
Tssr152556	18	16809096 to 16809118	22	-	TSS region	transcription start site region 152556
Tssr152557	18	16809233 to 16809324	91	-	TSS region	transcription start site region 152557
Gm15328	18	16816407 to 16822783	6376	+	lincRNA gene	predicted gene 15328
Gm7670	18	16839317 to 16839957	640	-	pseudogene	predicted gene 7670