Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:15478746-16589046

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chst9 18 15451773 to 15718046 266273 - protein coding gene carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
D18Mit197 18 15492568 to 15492690 122 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 197
D18Mit21 18 15533264 to 15533394 130 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 21
Gm30452 18 15605608 to 15620105 14497 + lncRNA gene predicted gene, 30452
Cpgi9736 18 15759464 to 15760378 914 CpG island CpG island 9736
Tssr152537 18 15760109 to 15760122 13 - TSS region transcription start site region 152537
Tssr152538 18 15760149 to 15760162 13 - TSS region transcription start site region 152538
Tssr152539 18 15822584 to 15822586 2 - TSS region transcription start site region 152539
Tssr150149 18 15832772 to 15832774 2 + TSS region transcription start site region 150149
Gm10036 18 15832794 to 15833327 533 + pseudogene predicted gene 10036
Gm24228 18 15874661 to 15874789 128 + snoRNA gene predicted gene, 24228
D18Mit116 18 15881143 to 15881281 138 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 116
Gm4835 18 15988368 to 15989339 971 + pseudogene predicted pseudogene 4835
Gm30512 18 16021076 to 16032288 11212 + lncRNA gene predicted gene, 30512
Gm22389 18 16033746 to 16034046 300 + unclassified non-coding RNA gene predicted gene, 22389
Gm41673 18 16037135 to 16039879 2744 - lncRNA gene predicted gene, 41673
Gm30620 18 16043618 to 16115424 71806 - lncRNA gene predicted gene, 30620
Tssr152540 18 16115368 to 16115383 15 - TSS region transcription start site region 152540
Gm50076 18 16136887 to 16144450 7563 - lincRNA gene predicted gene, 50076
Gm6078 18 16194035 to 16194648 613 - pseudogene predicted gene 6078
Gm24385 18 16221019 to 16221368 349 - unclassified non-coding RNA gene predicted gene, 24385
Tssr150150 18 16274571 to 16274588 17 + TSS region transcription start site region 150150
Gm7665 18 16274648 to 16274944 296 - pseudogene predicted pseudogene 7665
Tssr152541 18 16274981 to 16275013 32 - TSS region transcription start site region 152541
Gm30765 18 16293824 to 16318593 24769 + lncRNA gene predicted gene, 30765
Mwmlpt3 18 16414682 to 16414682 0 QTL Morris water maze latency to platform, training, 3
Mwmlpa3 18 16414682 to 16414682 0 QTL Morris water maze latency to platform, all, 3
Cdh2 18 16588877 to 16809246 220369 - protein coding gene cadherin 2