Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:15338264-15728394

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30230 18 15321025 to 15346206 25181 - lncRNA gene predicted gene, 30230
Tssr152528 18 15346195 to 15346200 5 - TSS region transcription start site region 152528
Tssr150148 18 15346346 to 15346365 19 + TSS region transcription start site region 150148
A830021F12Rik 18 15351934 to 15362306 10372 + protein coding gene RIKEN cDNA A830021F12 gene
Aqp4 18 15389496 to 15410982 21486 - protein coding gene aquaporin 4
Tssr152529 18 15402695 to 15402724 29 - TSS region transcription start site region 152529
Tssr152530 18 15402726 to 15402786 60 - TSS region transcription start site region 152530
Gm50048 18 15403087 to 15430790 27703 + antisense lncRNA gene predicted gene, 50048
Tssr152531 18 15403504 to 15403531 27 - TSS region transcription start site region 152531
Tssr152532 18 15403616 to 15403635 19 - TSS region transcription start site region 152532
Tssr152533 18 15403640 to 15403657 17 - TSS region transcription start site region 152533
Tssr152534 18 15403658 to 15403667 9 - TSS region transcription start site region 152534
Tssr152535 18 15403680 to 15403687 7 - TSS region transcription start site region 152535
Tssr152536 18 15403690 to 15403701 11 - TSS region transcription start site region 152536
Gm7650 18 15414474 to 15415367 893 + pseudogene predicted gene 7650
Chst9 18 15451773 to 15718046 266273 - protein coding gene carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
D18Mit170 18 15465747 to 15465844 97 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 170
D18Mit197 18 15492568 to 15492690 122 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 197
D18Mit21 18 15533264 to 15533394 130 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 21
Gm30452 18 15605608 to 15620105 14497 + lncRNA gene predicted gene, 30452