Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:15220608-16005105

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41672 18 15233049 to 15252008 18959 - lncRNA gene predicted gene, 41672
E430002N23Rik 18 15308858 to 15312699 3841 - unclassified non-coding RNA gene RIKEN cDNA E430002N23 gene
Tssr152524 18 15312693 to 15312733 40 - TSS region transcription start site region 152524
Tssr152525 18 15312738 to 15312752 14 - TSS region transcription start site region 152525
Tssr150146 18 15313458 to 15313465 7 + TSS region transcription start site region 150146
Gm30230 18 15321025 to 15346206 25181 - lncRNA gene predicted gene, 30230
Tssr150147 18 15324949 to 15324957 8 + TSS region transcription start site region 150147
Tssr152526 18 15331797 to 15331825 28 - TSS region transcription start site region 152526
Tssr152527 18 15331857 to 15331871 14 - TSS region transcription start site region 152527
Tssr152528 18 15346195 to 15346200 5 - TSS region transcription start site region 152528
Tssr150148 18 15346346 to 15346365 19 + TSS region transcription start site region 150148
A830021F12Rik 18 15351934 to 15362306 10372 + protein coding gene RIKEN cDNA A830021F12 gene
Aqp4 18 15389496 to 15410982 21486 - protein coding gene aquaporin 4
Tssr152529 18 15402695 to 15402724 29 - TSS region transcription start site region 152529
Tssr152530 18 15402726 to 15402786 60 - TSS region transcription start site region 152530
Gm50048 18 15403087 to 15430790 27703 + antisense lncRNA gene predicted gene, 50048
Tssr152531 18 15403504 to 15403531 27 - TSS region transcription start site region 152531
Tssr152532 18 15403616 to 15403635 19 - TSS region transcription start site region 152532
Tssr152533 18 15403640 to 15403657 17 - TSS region transcription start site region 152533
Tssr152534 18 15403658 to 15403667 9 - TSS region transcription start site region 152534
Tssr152535 18 15403680 to 15403687 7 - TSS region transcription start site region 152535
Tssr152536 18 15403690 to 15403701 11 - TSS region transcription start site region 152536
Gm7650 18 15414474 to 15415367 893 + pseudogene predicted gene 7650
Chst9 18 15451773 to 15718046 266273 - protein coding gene carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
D18Mit170 18 15465747 to 15465844 97 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 170
D18Mit197 18 15492568 to 15492690 122 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 197
D18Mit21 18 15533264 to 15533394 130 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 21
Gm30452 18 15605608 to 15620105 14497 + lncRNA gene predicted gene, 30452
Cpgi9736 18 15759464 to 15760378 914 CpG island CpG island 9736
Tssr152537 18 15760109 to 15760122 13 - TSS region transcription start site region 152537
Tssr152538 18 15760149 to 15760162 13 - TSS region transcription start site region 152538
Tssr152539 18 15822584 to 15822586 2 - TSS region transcription start site region 152539
Tssr150149 18 15832772 to 15832774 2 + TSS region transcription start site region 150149
Gm10036 18 15832794 to 15833327 533 + pseudogene predicted gene 10036
Gm24228 18 15874661 to 15874789 128 + snoRNA gene predicted gene, 24228
D18Mit116 18 15881143 to 15881281 138 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 116
Gm4835 18 15988368 to 15989339 971 + pseudogene predicted pseudogene 4835