Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:15172738-15452752

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr150140 18 15194468 to 15194483 15 + TSS region transcription start site region 150140
Tssr5250 18 15194752 to 15194765 13 + TSS region transcription start site region 5250
Tssr150141 18 15195204 to 15195249 45 + TSS region transcription start site region 150141
Tssr150142 18 15195250 to 15195261 11 + TSS region transcription start site region 150142
Tssr150143 18 15195266 to 15195277 11 + TSS region transcription start site region 150143
Tssr150144 18 15195373 to 15195384 11 + TSS region transcription start site region 150144
Tssr150145 18 15195388 to 15195410 22 + TSS region transcription start site region 150145
Gm50035 18 15201112 to 15207791 6679 - lincRNA gene predicted gene, 50035
Tssr152523 18 15207790 to 15207797 7 - TSS region transcription start site region 152523
Gm2629 18 15213100 to 15214264 1164 + pseudogene predicted gene 2629
Gm41672 18 15233049 to 15252008 18959 - lncRNA gene predicted gene, 41672
E430002N23Rik 18 15308858 to 15312699 3841 - unclassified non-coding RNA gene RIKEN cDNA E430002N23 gene
Tssr152524 18 15312693 to 15312733 40 - TSS region transcription start site region 152524
Tssr152525 18 15312738 to 15312752 14 - TSS region transcription start site region 152525
Tssr150146 18 15313458 to 15313465 7 + TSS region transcription start site region 150146
Gm30230 18 15321025 to 15346206 25181 - lncRNA gene predicted gene, 30230
Tssr150147 18 15324949 to 15324957 8 + TSS region transcription start site region 150147
Tssr152526 18 15331797 to 15331825 28 - TSS region transcription start site region 152526
Tssr152527 18 15331857 to 15331871 14 - TSS region transcription start site region 152527
Tssr152528 18 15346195 to 15346200 5 - TSS region transcription start site region 152528
Tssr150148 18 15346346 to 15346365 19 + TSS region transcription start site region 150148
A830021F12Rik 18 15351934 to 15362306 10372 + protein coding gene RIKEN cDNA A830021F12 gene
Aqp4 18 15389496 to 15410982 21486 - protein coding gene aquaporin 4
Tssr152529 18 15402695 to 15402724 29 - TSS region transcription start site region 152529
Tssr152530 18 15402726 to 15402786 60 - TSS region transcription start site region 152530
Gm50048 18 15403087 to 15430790 27703 + antisense lncRNA gene predicted gene, 50048
Tssr152531 18 15403504 to 15403531 27 - TSS region transcription start site region 152531
Tssr152532 18 15403616 to 15403635 19 - TSS region transcription start site region 152532
Tssr152533 18 15403640 to 15403657 17 - TSS region transcription start site region 152533
Tssr152534 18 15403658 to 15403667 9 - TSS region transcription start site region 152534
Tssr152535 18 15403680 to 15403687 7 - TSS region transcription start site region 152535
Tssr152536 18 15403690 to 15403701 11 - TSS region transcription start site region 152536
Gm7650 18 15414474 to 15415367 893 + pseudogene predicted gene 7650
Chst9 18 15451773 to 15718046 266273 - protein coding gene carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9