Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:14642648-15149364

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ss18 18 14625629 to 14683002 57373 - protein coding gene SS18, nBAF chromatin remodeling complex subunit
Gm24924 18 14647767 to 14647930 163 - snRNA gene predicted gene, 24924
Cpgi9732 18 14681795 to 14683437 1642 CpG island CpG island 9732
Tssr152504 18 14682756 to 14682782 26 - TSS region transcription start site region 152504
Tssr152505 18 14683281 to 14683309 28 - TSS region transcription start site region 152505
Tssr152506 18 14683312 to 14683331 19 - TSS region transcription start site region 152506
D18Mit20 18 14702007 to 14702189 182 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 20
Tssr150131 18 14706136 to 14706143 7 + TSS region transcription start site region 150131
Tssr150132 18 14706145 to 14706232 87 + TSS region transcription start site region 150132
Psma8 18 14706151 to 14762301 56150 + protein coding gene proteasome (prosome, macropain) subunit, alpha type, 8
Tssr152507 18 14729333 to 14729336 3 - TSS region transcription start site region 152507
Tssr152508 18 14729347 to 14729358 11 - TSS region transcription start site region 152508
Cpgi9733 18 14782819 to 14784055 1236 CpG island CpG island 9733
Tssr150133 18 14783194 to 14783221 27 + TSS region transcription start site region 150133
Tssr150134 18 14783238 to 14783259 21 + TSS region transcription start site region 150134
Taf4b 18 14783245 to 14900359 117114 + protein coding gene TATA-box binding protein associated factor 4b
Gm21055 18 14830668 to 14832016 1348 + pseudogene predicted gene, 21055
Tssr150135 18 14848006 to 14848007 1 + TSS region transcription start site region 150135
4930543D07Rik 18 14892648 to 14899364 6716 - lncRNA gene RIKEN cDNA 4930543D07 gene
Tssr152509 18 14899365 to 14899383 18 - TSS region transcription start site region 152509
Gm9474 18 14922055 to 14924111 2056 - pseudogene predicted gene 9474
Kctd1 18 14968685 to 15151446 182761 - protein coding gene potassium channel tetramerisation domain containing 1
4933424G05Rik 18 14988995 to 15047987 58992 + lncRNA gene RIKEN cDNA 4933424G05 gene
Tssr150136 18 15011240 to 15011264 24 + TSS region transcription start site region 150136
Gm6304 18 15011246 to 15011692 446 + pseudogene predicted gene 6304
Cpgi9734 18 15061852 to 15065170 3318 CpG island CpG island 9734
Tssr152510 18 15063560 to 15063617 57 - TSS region transcription start site region 152510
Tssr152511 18 15063629 to 15063655 26 - TSS region transcription start site region 152511
Tssr152512 18 15064077 to 15064114 37 - TSS region transcription start site region 152512
Tssr152513 18 15064118 to 15064140 22 - TSS region transcription start site region 152513
Tssr152514 18 15064144 to 15064155 11 - TSS region transcription start site region 152514
Tssr152515 18 15064198 to 15064226 28 - TSS region transcription start site region 152515
Tssr152516 18 15064311 to 15064335 24 - TSS region transcription start site region 152516
Tssr152517 18 15064343 to 15064356 13 - TSS region transcription start site region 152517
Tssr152518 18 15064363 to 15064374 11 - TSS region transcription start site region 152518
Tssr152519 18 15064421 to 15064443 22 - TSS region transcription start site region 152519
Tssr152520 18 15064447 to 15064476 29 - TSS region transcription start site region 152520
Gm30119 18 15149295 to 15150756 1461 + lncRNA gene predicted gene, 30119