Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:14421151-15047301

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr150130 18 14424821 to 14424823 2 + TSS region transcription start site region 150130
Gm5160 18 14424868 to 14425303 435 + pseudogene predicted gene 5160
Gm10270 18 14491859 to 14492346 487 protein coding gene predicted pseudogene 10270
Gm50098 18 14492005 to 14492243 238 + pseudogene predicted gene, 50098
Gm6457 18 14570147 to 14570638 491 + pseudogene predicted pseudogene 6457
D18Mit222 18 14587509 to 14587699 190 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 222
Intim3 18 14587509 to 14587699 190 QTL intima modifier 3
Intmrm3 18 14587509 to 14587699 190 QTL intima/media ratio modifier 3
Ss18 18 14625629 to 14683002 57373 - protein coding gene SS18, nBAF chromatin remodeling complex subunit
D18Mit92 18 14637009 to 14637143 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 92
D18Mit92.3 18 14637118 to 14637304 186 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 92.3
Gm24924 18 14647767 to 14647930 163 - snRNA gene predicted gene, 24924
Cpgi9732 18 14681795 to 14683437 1642 CpG island CpG island 9732
Tssr152504 18 14682756 to 14682782 26 - TSS region transcription start site region 152504
Tssr152505 18 14683281 to 14683309 28 - TSS region transcription start site region 152505
Tssr152506 18 14683312 to 14683331 19 - TSS region transcription start site region 152506
D18Mit20 18 14702007 to 14702189 182 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 20
Tssr150131 18 14706136 to 14706143 7 + TSS region transcription start site region 150131
Tssr150132 18 14706145 to 14706232 87 + TSS region transcription start site region 150132
Psma8 18 14706151 to 14762301 56150 + protein coding gene proteasome (prosome, macropain) subunit, alpha type, 8
Tssr152507 18 14729333 to 14729336 3 - TSS region transcription start site region 152507
Tssr152508 18 14729347 to 14729358 11 - TSS region transcription start site region 152508
Cpgi9733 18 14782819 to 14784055 1236 CpG island CpG island 9733
Tssr150133 18 14783194 to 14783221 27 + TSS region transcription start site region 150133
Tssr150134 18 14783238 to 14783259 21 + TSS region transcription start site region 150134
Taf4b 18 14783245 to 14900359 117114 + protein coding gene TATA-box binding protein associated factor 4b
Gm21055 18 14830668 to 14832016 1348 + pseudogene predicted gene, 21055
Tssr150135 18 14848006 to 14848007 1 + TSS region transcription start site region 150135
4930543D07Rik 18 14892648 to 14899364 6716 - lncRNA gene RIKEN cDNA 4930543D07 gene
Tssr152509 18 14899365 to 14899383 18 - TSS region transcription start site region 152509
Gm9474 18 14922055 to 14924111 2056 - pseudogene predicted gene 9474
Kctd1 18 14968685 to 15151446 182761 - protein coding gene potassium channel tetramerisation domain containing 1
4933424G05Rik 18 14988995 to 15047987 58992 + lncRNA gene RIKEN cDNA 4933424G05 gene
Tssr150136 18 15011240 to 15011264 24 + TSS region transcription start site region 150136
Gm6304 18 15011246 to 15011692 446 + pseudogene predicted gene 6304