Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:13939209-14701676

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp521 18 13687013 to 13972787 285774 - protein coding gene zinc finger protein 521
Cpgi9729 18 13969974 to 13970858 884 CpG island CpG island 9729
Cpgi9730 18 13971134 to 13971660 526 CpG island CpG island 9730
Tssr152499 18 13972085 to 13972091 6 - TSS region transcription start site region 152499
Tssr152500 18 13972185 to 13972188 3 - TSS region transcription start site region 152500
Cpgi9731 18 13972203 to 13973122 919 CpG island CpG island 9731
Tssr152501 18 13972511 to 13972524 13 - TSS region transcription start site region 152501
Tssr152502 18 13972536 to 13972553 17 - TSS region transcription start site region 152502
Tssr152503 18 13972617 to 13972702 85 - TSS region transcription start site region 152503
Tssr150128 18 13973022 to 13973028 6 + TSS region transcription start site region 150128
6330525I24Rik 18 13998006 to 13999462 1456 unclassified gene RIKEN cDNA 6330525I24 gene
AU018823 18 14069376 to 14070185 809 unclassified gene expressed sequence AU018823
8430422H06Rik 18 14232309 to 14278542 46233 + lncRNA gene RIKEN cDNA 8430422H06 gene
Gm50095 18 14308387 to 14308780 393 + pseudogene predicted gene, 50095
Gm29992 18 14309209 to 14331676 22467 - lncRNA gene predicted gene, 29992
Tssr150129 18 14331855 to 14331867 12 + TSS region transcription start site region 150129
Gm50097 18 14331861 to 14333396 1535 + lincRNA gene predicted gene, 50097
Tssr150130 18 14424821 to 14424823 2 + TSS region transcription start site region 150130
Gm5160 18 14424868 to 14425303 435 + pseudogene predicted gene 5160
Gm10270 18 14491859 to 14492346 487 protein coding gene predicted pseudogene 10270
Gm50098 18 14492005 to 14492243 238 + pseudogene predicted gene, 50098
Gm6457 18 14570147 to 14570638 491 + pseudogene predicted pseudogene 6457
Intmrm3 18 14587509 to 14587699 190 QTL intima/media ratio modifier 3
D18Mit222 18 14587509 to 14587699 190 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 222
Intim3 18 14587509 to 14587699 190 QTL intima modifier 3
Ss18 18 14625629 to 14683002 57373 - protein coding gene SS18, nBAF chromatin remodeling complex subunit
D18Mit92 18 14637009 to 14637143 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 92
D18Mit92.3 18 14637118 to 14637304 186 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 92.3
Gm24924 18 14647767 to 14647930 163 - snRNA gene predicted gene, 24924
Cpgi9732 18 14681795 to 14683437 1642 CpG island CpG island 9732
Tssr152504 18 14682756 to 14682782 26 - TSS region transcription start site region 152504
Tssr152505 18 14683281 to 14683309 28 - TSS region transcription start site region 152505
Tssr152506 18 14683312 to 14683331 19 - TSS region transcription start site region 152506