Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
D18Mit156 | 18 | 107 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 156 | ||
Gm50093 | 18 | 463 | + | pseudogene | predicted gene, 50093 | |
D18Mit169 | 18 | 117 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 169 | ||
Gm36689 | 18 | 8572 | + | lncRNA gene | predicted gene, 36689 | |
Tssr150126 | 18 | 5 | + | TSS region | transcription start site region 150126 | |
Tssr150127 | 18 | 19 | + | TSS region | transcription start site region 150127 | |
Gm36747 | 18 | 16184 | + | lncRNA gene | predicted gene, 36747 | |
Gm36802 | 18 | 17606 | - | lncRNA gene | predicted gene, 36802 | |
Gm41670 | 18 | 54640 | - | lncRNA gene | predicted gene, 41670 | |
D18Mit30 | 18 | 151 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 30 | ||
Gm36910 | 18 | 30401 | + | lncRNA gene | predicted gene, 36910 | |
Zfp521 | 18 | 285774 | - | protein coding gene | zinc finger protein 521 | |
Tssr152495 | 18 | 4 | - | TSS region | transcription start site region 152495 | |
Tssr152496 | 18 | 4 | - | TSS region | transcription start site region 152496 | |
Tssr152497 | 18 | 4 | - | TSS region | transcription start site region 152497 | |
D18Mit32 | 18 | 158 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 32 | ||
Mom3 | 18 | 53068925 | QTL | modifier of Min 3 | ||
Gm50094 | 18 | 2934 | - | unclassified gene | predicted gene, 50094 | |
Tssr152498 | 18 | 4 | - | TSS region | transcription start site region 152498 | |
Cpgi9729 | 18 | 884 | CpG island | CpG island 9729 | ||
Cpgi9730 | 18 | 526 | CpG island | CpG island 9730 | ||
Tssr152499 | 18 | 6 | - | TSS region | transcription start site region 152499 | |
Tssr152500 | 18 | 3 | - | TSS region | transcription start site region 152500 | |
Cpgi9731 | 18 | 919 | CpG island | CpG island 9731 | ||
Tssr152501 | 18 | 13 | - | TSS region | transcription start site region 152501 | |
Tssr152502 | 18 | 17 | - | TSS region | transcription start site region 152502 | |
Tssr152503 | 18 | 85 | - | TSS region | transcription start site region 152503 | |
Tssr150128 | 18 | 6 | + | TSS region | transcription start site region 150128 | |
6330525I24Rik | 18 | 1456 | unclassified gene | RIKEN cDNA 6330525I24 gene | ||
AU018823 | 18 | 809 | unclassified gene | expressed sequence AU018823 | ||
8430422H06Rik | 18 | 46233 | + | lncRNA gene | RIKEN cDNA 8430422H06 gene | |
Gm50095 | 18 | 393 | + | pseudogene | predicted gene, 50095 | |
Gm29992 | 18 | 22467 | - | lncRNA gene | predicted gene, 29992 | |
Tssr150129 | 18 | 12 | + | TSS region | transcription start site region 150129 | |
Gm50097 | 18 | 1535 | + | lincRNA gene | predicted gene, 50097 | |
Tssr150130 | 18 | 2 | + | TSS region | transcription start site region 150130 | |
Gm5160 | 18 | 435 | + | pseudogene | predicted gene 5160 | |
Gm10270 | 18 | 487 | protein coding gene | predicted pseudogene 10270 | ||
Gm50098 | 18 | 238 | + | pseudogene | predicted gene, 50098 | |
Gm6457 | 18 | 491 | + | pseudogene | predicted pseudogene 6457 | |
Intim3 | 18 | 190 | QTL | intima modifier 3 | ||
Intmrm3 | 18 | 190 | QTL | intima/media ratio modifier 3 | ||
D18Mit222 | 18 | 190 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 222 | ||
Ss18 | 18 | 57373 | - | protein coding gene | SS18, nBAF chromatin remodeling complex subunit | |
D18Mit92 | 18 | 134 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 92 | ||
D18Mit92.3 | 18 | 186 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 92.3 | ||
Gm24924 | 18 | 163 | - | snRNA gene | predicted gene, 24924 | |
Cpgi9732 | 18 | 1642 | CpG island | CpG island 9732 | ||
Tssr152504 | 18 | 26 | - | TSS region | transcription start site region 152504 | |
Tssr152505 | 18 | 28 | - | TSS region | transcription start site region 152505 | |
Tssr152506 | 18 | 19 | - | TSS region | transcription start site region 152506 | |
D18Mit20 | 18 | 182 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 20 | ||
Tssr150131 | 18 | 7 | + | TSS region | transcription start site region 150131 | |
Tssr150132 | 18 | 87 | + | TSS region | transcription start site region 150132 | |
Psma8 | 18 | 56150 | + | protein coding gene | proteasome (prosome, macropain) subunit, alpha type, 8 | |
Tssr152507 | 18 | 3 | - | TSS region | transcription start site region 152507 | |
Tssr152508 | 18 | 11 | - | TSS region | transcription start site region 152508 | |
Cpgi9733 | 18 | 1236 | CpG island | CpG island 9733 | ||
Tssr150133 | 18 | 27 | + | TSS region | transcription start site region 150133 | |
Tssr150134 | 18 | 21 | + | TSS region | transcription start site region 150134 | |
Taf4b | 18 | 117114 | + | protein coding gene | TATA-box binding protein associated factor 4b | |
Gm21055 | 18 | 1348 | + | pseudogene | predicted gene, 21055 | |
Tssr150135 | 18 | 1 | + | TSS region | transcription start site region 150135 | |
4930543D07Rik | 18 | 6716 | - | lncRNA gene | RIKEN cDNA 4930543D07 gene | |
Tssr152509 | 18 | 18 | - | TSS region | transcription start site region 152509 | |
Gm9474 | 18 | 2056 | - | pseudogene | predicted gene 9474 | |
Kctd1 | 18 | 182761 | - | protein coding gene | potassium channel tetramerisation domain containing 1 | |
4933424G05Rik | 18 | 58992 | + | lncRNA gene | RIKEN cDNA 4933424G05 gene | |
Tssr150136 | 18 | 24 | + | TSS region | transcription start site region 150136 | |
Gm6304 | 18 | 446 | + | pseudogene | predicted gene 6304 | |
Cpgi9734 | 18 | 3318 | CpG island | CpG island 9734 | ||
Tssr152510 | 18 | 57 | - | TSS region | transcription start site region 152510 | |
Tssr152511 | 18 | 26 | - | TSS region | transcription start site region 152511 | |
Tssr152512 | 18 | 37 | - | TSS region | transcription start site region 152512 | |
Tssr152513 | 18 | 22 | - | TSS region | transcription start site region 152513 | |
Tssr152514 | 18 | 11 | - | TSS region | transcription start site region 152514 | |
Tssr152515 | 18 | 28 | - | TSS region | transcription start site region 152515 | |
Tssr152516 | 18 | 24 | - | TSS region | transcription start site region 152516 | |
Tssr152517 | 18 | 13 | - | TSS region | transcription start site region 152517 | |
Tssr152518 | 18 | 11 | - | TSS region | transcription start site region 152518 | |
Tssr152519 | 18 | 22 | - | TSS region | transcription start site region 152519 | |
Tssr152520 | 18 | 29 | - | TSS region | transcription start site region 152520 | |
Gm30119 | 18 | 1461 | + | lncRNA gene | predicted gene, 30119 | |
Cpgi9735 | 18 | 1712 | CpG island | CpG island 9735 | ||
Tssr150137 | 18 | 15 | + | TSS region | transcription start site region 150137 | |
Tssr150138 | 18 | 11 | + | TSS region | transcription start site region 150138 | |
Tssr150139 | 18 | 5 | + | TSS region | transcription start site region 150139 | |
Tssr152521 | 18 | 28 | - | TSS region | transcription start site region 152521 | |
Tssr152522 | 18 | 4 | - | TSS region | transcription start site region 152522 | |
Tssr150140 | 18 | 15 | + | TSS region | transcription start site region 150140 | |
Tssr5250 | 18 | 13 | + | TSS region | transcription start site region 5250 | |
Tssr150141 | 18 | 45 | + | TSS region | transcription start site region 150141 | |
Tssr150142 | 18 | 11 | + | TSS region | transcription start site region 150142 | |
Tssr150143 | 18 | 11 | + | TSS region | transcription start site region 150143 | |
Tssr150144 | 18 | 11 | + | TSS region | transcription start site region 150144 | |
Tssr150145 | 18 | 22 | + | TSS region | transcription start site region 150145 | |
Gm50035 | 18 | 6679 | - | lincRNA gene | predicted gene, 50035 | |
Tssr152523 | 18 | 7 | - | TSS region | transcription start site region 152523 | |
Gm2629 | 18 | 1164 | + | pseudogene | predicted gene 2629 | |
Gm41672 | 18 | 18959 | - | lncRNA gene | predicted gene, 41672 | |
E430002N23Rik | 18 | 3841 | - | unclassified non-coding RNA gene | RIKEN cDNA E430002N23 gene | |
Tssr152524 | 18 | 40 | - | TSS region | transcription start site region 152524 | |
Tssr152525 | 18 | 14 | - | TSS region | transcription start site region 152525 | |
Tssr150146 | 18 | 7 | + | TSS region | transcription start site region 150146 | |
Gm30230 | 18 | 25181 | - | lncRNA gene | predicted gene, 30230 | |
Tssr150147 | 18 | 8 | + | TSS region | transcription start site region 150147 | |
Tssr152526 | 18 | 28 | - | TSS region | transcription start site region 152526 | |
Tssr152527 | 18 | 14 | - | TSS region | transcription start site region 152527 | |
Tssr152528 | 18 | 5 | - | TSS region | transcription start site region 152528 | |
Tssr150148 | 18 | 19 | + | TSS region | transcription start site region 150148 | |
A830021F12Rik | 18 | 10372 | + | protein coding gene | RIKEN cDNA A830021F12 gene | |
Aqp4 | 18 | 21486 | - | protein coding gene | aquaporin 4 | |
Tssr152529 | 18 | 29 | - | TSS region | transcription start site region 152529 | |
Tssr152530 | 18 | 60 | - | TSS region | transcription start site region 152530 | |
Gm50048 | 18 | 27703 | + | antisense lncRNA gene | predicted gene, 50048 | |
Tssr152531 | 18 | 27 | - | TSS region | transcription start site region 152531 | |
Tssr152532 | 18 | 19 | - | TSS region | transcription start site region 152532 | |
Tssr152533 | 18 | 17 | - | TSS region | transcription start site region 152533 | |
Tssr152534 | 18 | 9 | - | TSS region | transcription start site region 152534 | |
Tssr152535 | 18 | 7 | - | TSS region | transcription start site region 152535 | |
Tssr152536 | 18 | 11 | - | TSS region | transcription start site region 152536 | |
Gm7650 | 18 | 893 | + | pseudogene | predicted gene 7650 | |
Chst9 | 18 | 266273 | - | protein coding gene | carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 | |
D18Mit170 | 18 | 97 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 170 | ||
D18Mit197 | 18 | 122 | DNA segment | DNA Segment, Chr 18, Massachusetts Institute of Technology 197 | ||
D18Mit21 | 18 | 130 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 21 | ||
Gm30452 | 18 | 14497 | + | lncRNA gene | predicted gene, 30452 | |
Cpgi9736 | 18 | 914 | CpG island | CpG island 9736 | ||
Tssr152537 | 18 | 13 | - | TSS region | transcription start site region 152537 | |
Tssr152538 | 18 | 13 | - | TSS region | transcription start site region 152538 | |
Tssr152539 | 18 | 2 | - | TSS region | transcription start site region 152539 | |
Tssr150149 | 18 | 2 | + | TSS region | transcription start site region 150149 | |
Gm10036 | 18 | 533 | + | pseudogene | predicted gene 10036 | |
Gm24228 | 18 | 128 | + | snoRNA gene | predicted gene, 24228 | |
D18Mit116 | 18 | 138 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 116 | ||
Gm4835 | 18 | 971 | + | pseudogene | predicted pseudogene 4835 | |
Gm30512 | 18 | 11212 | + | lncRNA gene | predicted gene, 30512 | |
Gm22389 | 18 | 300 | + | unclassified non-coding RNA gene | predicted gene, 22389 | |
Gm41673 | 18 | 2744 | - | lncRNA gene | predicted gene, 41673 | |
Gm30620 | 18 | 71806 | - | lncRNA gene | predicted gene, 30620 | |
Tssr152540 | 18 | 15 | - | TSS region | transcription start site region 152540 | |
Gm50076 | 18 | 7563 | - | lincRNA gene | predicted gene, 50076 | |
Gm6078 | 18 | 613 | - | pseudogene | predicted gene 6078 | |
Gm24385 | 18 | 349 | - | unclassified non-coding RNA gene | predicted gene, 24385 | |
Tssr150150 | 18 | 17 | + | TSS region | transcription start site region 150150 | |
Gm7665 | 18 | 296 | - | pseudogene | predicted pseudogene 7665 | |
Tssr152541 | 18 | 32 | - | TSS region | transcription start site region 152541 | |
Gm30765 | 18 | 24769 | + | lncRNA gene | predicted gene, 30765 | |
Mwmlpt3 | 18 | 0 | QTL | Morris water maze latency to platform, training, 3 | ||
Mwmlpa3 | 18 | 0 | QTL | Morris water maze latency to platform, all, 3 | ||
Cdh2 | 18 | 220369 | - | protein coding gene | cadherin 2 | |
3100003M19Rik | 18 | 1990 | unclassified non-coding RNA gene | RIKEN cDNA 3100003M19 gene | ||
Tssr152542 | 18 | 10 | - | TSS region | transcription start site region 152542 | |
Tssr152543 | 18 | 13 | - | TSS region | transcription start site region 152543 | |
9430011C21Rik | 18 | 2193 | unclassified gene | RIKEN cDNA 9430011C21 gene | ||
Gm15485 | 18 | 945 | + | antisense lncRNA gene | predicted gene 15485 | |
Tssr152544 | 18 | 9 | - | TSS region | transcription start site region 152544 | |
Tssr152545 | 18 | 17 | - | TSS region | transcription start site region 152545 | |
Tssr5251 | 18 | 21 | - | TSS region | transcription start site region 5251 | |
Tssr152546 | 18 | 4 | - | TSS region | transcription start site region 152546 | |
Tssr152547 | 18 | 3 | - | TSS region | transcription start site region 152547 | |
Tssr152548 | 18 | 49 | - | TSS region | transcription start site region 152548 | |
Tssr152549 | 18 | 2 | - | TSS region | transcription start site region 152549 | |
Mdq3 | 18 | 0 | QTL | mammary ductal QTL 3 | ||
D18Mit191 | 18 | 116 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 191 | ||
Cpgi9737 | 18 | 3077 | CpG island | CpG island 9737 | ||
Tssr152550 | 18 | 63 | - | TSS region | transcription start site region 152550 | |
Tssr152551 | 18 | 11 | - | TSS region | transcription start site region 152551 | |
Tssr152552 | 18 | 31 | - | TSS region | transcription start site region 152552 | |
Tssr152553 | 18 | 61 | - | TSS region | transcription start site region 152553 | |
Tssr152554 | 18 | 86 | - | TSS region | transcription start site region 152554 | |
Tssr152555 | 18 | 22 | - | TSS region | transcription start site region 152555 | |
Tssr152556 | 18 | 22 | - | TSS region | transcription start site region 152556 | |
Tssr152557 | 18 | 91 | - | TSS region | transcription start site region 152557 | |
Gm15328 | 18 | 6376 | + | lincRNA gene | predicted gene 15328 | |
Gm7670 | 18 | 640 | - | pseudogene | predicted gene 7670 | |
Gm18399 | 18 | 819 | - | pseudogene | predicted gene, 18399 | |
Tssr152558 | 18 | 10 | - | TSS region | transcription start site region 152558 | |
Tssr150151 | 18 | 31 | + | TSS region | transcription start site region 150151 | |
D18Mit171 | 18 | 109 | DNA segment | DNA segment, Chr 18, Massachusetts Institute of Technology 171 | ||
Gm22470 | 18 | 129 | + | snoRNA gene | predicted gene, 22470 | |
1700001G01Rik | 18 | 102051 | + | lincRNA gene | RIKEN cDNA 1700001G01 gene | |
Gm41674 | 18 | 7726 | + | lncRNA gene | predicted gene, 41674 | |
Gm24015 | 18 | 231 | - | unclassified non-coding RNA gene | predicted gene, 24015 | |
4921533I20Rik | 18 | 999 | - | pseudogene | Riken cDNA 4921533I20 gene | |
Gm30960 | 18 | 2383 | - | lncRNA gene | predicted gene, 30960 | |
Gm18928 | 18 | 1218 | - | pseudogene | predicted gene, 18928 | |
Gm31018 | 18 | 54962 | - | lncRNA gene | predicted gene, 31018 |