Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:13002709-13901281

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr150125 18 13006935 to 13006950 15 + TSS region transcription start site region 150125
Hrh4 18 13006990 to 13022882 15892 + protein coding gene histamine receptor H4
Tssr152494 18 13122479 to 13122493 14 - TSS region transcription start site region 152494
Gm5240 18 13130675 to 13131561 886 - pseudogene predicted gene 5240
Gm36563 18 13140643 to 13145419 4776 + lncRNA gene predicted gene, 36563
Gm18083 18 13152065 to 13152805 740 - pseudogene predicted gene, 18083
Gm22251 18 13209702 to 13209808 106 - snRNA gene predicted gene, 22251
Gm41669 18 13286047 to 13306338 20291 - lncRNA gene predicted gene, 41669
Cpgi9728 18 13305915 to 13306083 168 CpG island CpG island 9728
D18Mit156 18 13319480 to 13319587 107 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 156
Gm50093 18 13372089 to 13372552 463 + pseudogene predicted gene, 50093
D18Mit169 18 13441795 to 13441912 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 169
Gm36689 18 13447709 to 13456281 8572 + lncRNA gene predicted gene, 36689
Tssr150126 18 13451999 to 13452004 5 + TSS region transcription start site region 150126
Tssr150127 18 13508381 to 13508400 19 + TSS region transcription start site region 150127
Gm36747 18 13508399 to 13524583 16184 + lncRNA gene predicted gene, 36747
Gm36802 18 13524673 to 13542279 17606 - lncRNA gene predicted gene, 36802
Gm41670 18 13546625 to 13601265 54640 - lncRNA gene predicted gene, 41670
D18Mit30 18 13570147 to 13570298 151 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 30
Gm36910 18 13655805 to 13686206 30401 + lncRNA gene predicted gene, 36910
Zfp521 18 13687013 to 13972787 285774 - protein coding gene zinc finger protein 521
Tssr152495 18 13726733 to 13726737 4 - TSS region transcription start site region 152495
Tssr152496 18 13815655 to 13815659 4 - TSS region transcription start site region 152496
Tssr152497 18 13849832 to 13849836 4 - TSS region transcription start site region 152497
Mom3 18 13896966 to 66965891 53068925 QTL modifier of Min 3
D18Mit32 18 13896966 to 13897124 158 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 32
Gm50094 18 13900536 to 13903470 2934 - unclassified gene predicted gene, 50094