Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:12885643-13400419

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Osbpl1a 18 12755314 to 12941841 186527 - protein coding gene oxysterol binding protein-like 1A
Tssr152488 18 12889076 to 12889102 26 - TSS region transcription start site region 152488
Gm5687 18 12898427 to 12899066 639 + pseudogene predicted gene 5687
Cpgi9724 18 12941259 to 12942036 777 CpG island CpG island 9724
Tssr152489 18 12941663 to 12941678 15 - TSS region transcription start site region 152489
Tssr152490 18 12941686 to 12941697 11 - TSS region transcription start site region 152490
Tssr152491 18 12941777 to 12941800 23 - TSS region transcription start site region 152491
Tssr152492 18 12941801 to 12941866 65 - TSS region transcription start site region 152492
Cpgi9725 18 12949278 to 12949496 218 CpG island CpG island 9725
Gm36490 18 12953398 to 12962658 9260 + lncRNA gene predicted gene, 36490
Cpgi9726 18 12955551 to 12956063 512 CpG island CpG island 9726
Tssr152493 18 12955750 to 12955778 28 - TSS region transcription start site region 152493
Tssr150119 18 12955807 to 12955819 12 + TSS region transcription start site region 150119
Tssr150120 18 12955821 to 12955851 30 + TSS region transcription start site region 150120
Gm26407 18 12961499 to 12961805 306 + unclassified non-coding RNA gene predicted gene, 26407
Impact 18 12962942 to 12992950 30008 + protein coding gene impact, RWD domain protein
Tssr150121 18 12972225 to 12972314 89 + TSS region transcription start site region 150121
Cpgi9727 18 12972827 to 12974631 1804 CpG island CpG island 9727
Tssr150122 18 12974418 to 12974437 19 + TSS region transcription start site region 150122
Tssr150123 18 12974503 to 12974586 83 + TSS region transcription start site region 150123
Tssr150124 18 12991526 to 12991531 5 + TSS region transcription start site region 150124
Tssr150125 18 13006935 to 13006950 15 + TSS region transcription start site region 150125
Hrh4 18 13006990 to 13022882 15892 + protein coding gene histamine receptor H4
Tssr152494 18 13122479 to 13122493 14 - TSS region transcription start site region 152494
Gm5240 18 13130675 to 13131561 886 - pseudogene predicted gene 5240
Gm36563 18 13140643 to 13145419 4776 + lncRNA gene predicted gene, 36563
Gm18083 18 13152065 to 13152805 740 - pseudogene predicted gene, 18083
Gm22251 18 13209702 to 13209808 106 - snRNA gene predicted gene, 22251
Gm41669 18 13286047 to 13306338 20291 - lncRNA gene predicted gene, 41669
Cpgi9728 18 13305915 to 13306083 168 CpG island CpG island 9728
D18Mit156 18 13319480 to 13319587 107 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 156
Gm50093 18 13372089 to 13372552 463 + pseudogene predicted gene, 50093