MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:11074652-11726895

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gata6	18	11052510 to 11085636	33126	+	protein coding gene	GATA binding protein 6
Tssr150065	18	11084122 to 11084131	9	+	TSS region	transcription start site region 150065
D18Mit31	18	11196303 to 11196417	114		DNA segment	DNA segment, Chr 18, Massachusetts Institute of Technology 31
Cpgi9709	18	11239641 to 11240267	626		CpG island	CpG island 9709
Cpgi9710	18	11351902 to 11352534	632		CpG island	CpG island 9710
Gm35918	18	11399652 to 11401895	2243	-	lncRNA gene	predicted gene, 35918
Gm50067	18	11624915 to 11625507	592	+	pseudogene	predicted gene, 50067
Rbbp8	18	11633276 to 11743207	109931	+	protein coding gene	retinoblastoma binding protein 8, endonuclease
Tssr150066	18	11633340 to 11633357	17	+	TSS region	transcription start site region 150066
Tssr150067	18	11633363 to 11633381	18	+	TSS region	transcription start site region 150067
Gm50069	18	11655420 to 11657784	2364	-	antisense lncRNA gene	predicted gene, 50069
Cpgi9711	18	11656997 to 11658348	1351		CpG island	CpG island 9711
Tssr150068	18	11657352 to 11657486	134	+	TSS region	transcription start site region 150068
Tssr150069	18	11657489 to 11657502	13	+	TSS region	transcription start site region 150069
Tssr150070	18	11657521 to 11657553	32	+	TSS region	transcription start site region 150070
Tssr152451	18	11657745 to 11657756	11	-	TSS region	transcription start site region 152451
Tssr150071	18	11657831 to 11657876	45	+	TSS region	transcription start site region 150071
Tssr150072	18	11722648 to 11722667	19	+	TSS region	transcription start site region 150072