Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:94271227-95066517

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm22593 17 94328755 to 94328863 108 - snRNA gene predicted gene, 22593
Tssr146266 17 94608147 to 94608148 1 + TSS region transcription start site region 146266
Gm9416 17 94608185 to 94608497 312 + pseudogene predicted gene 9416
Gm50005 17 94660397 to 94660855 458 + pseudogene predicted gene, 50005
Gm41655 17 94666227 to 94671517 5290 - pseudogene predicted gene, 41655
Gm50006 17 94692889 to 94693341 452 + pseudogene predicted gene, 50006
Mettl4 17 94722590 to 94750019 27429 - protein coding gene methyltransferase like 4
5430439M09Rik 17 94722593 to 94723289 696 unclassified gene RIKEN cDNA 5430439M09 gene
Tssr149877 17 94749506 to 94749509 3 - TSS region transcription start site region 149877
Cpgi9658 17 94749541 to 94750388 847 CpG island CpG island 9658
Tssr149878 17 94749874 to 94749887 13 - TSS region transcription start site region 149878
Tssr149879 17 94749971 to 94750046 75 - TSS region transcription start site region 149879
Tssr146267 17 94750095 to 94750121 26 + TSS region transcription start site region 146267
2700099C18Rik 17 94750100 to 94775129 25029 + pseudogene RIKEN cDNA 2700099C18 gene
Tssr146268 17 94750125 to 94750141 16 + TSS region transcription start site region 146268
Gm27038 17 94756698 to 94756872 174 - pseudogene predicted gene, 27038
Gm1976 17 94759944 to 94834799 74855 - lincRNA gene predicted gene 1976
Gm23964 17 94764825 to 94764931 106 + rRNA gene predicted gene, 23964
Tssr5234 17 94774459 to 94774505 46 + TSS region transcription start site region 5234
Amd-ps7 17 94803193 to 94803818 625 + pseudogene S-adenosylmethionine decarboxylase, pseudogene 7
Gm50009 17 94811611 to 94812922 1311 - unclassified gene predicted gene, 50009
Gm50010 17 94814741 to 94816063 1322 - unclassified gene predicted gene, 50010
Tssr149880 17 94834410 to 94834443 33 - TSS region transcription start site region 149880
Tssr149881 17 94834743 to 94834759 16 - TSS region transcription start site region 149881
Tssr149882 17 94834768 to 94834804 36 - TSS region transcription start site region 149882
Tssr146269 17 94834888 to 94834924 36 + TSS region transcription start site region 146269
Gm26734 17 94834906 to 94836642 1736 + lincRNA gene predicted gene, 26734
Gm19853 17 94858219 to 94858618 399 - pseudogene predicted gene, 19853
Tssr146270 17 94864886 to 94864922 36 + TSS region transcription start site region 146270
Gm20939 17 94864918 to 94878321 13403 + protein coding gene predicted gene, 20939
Tssr146271 17 94864928 to 94864933 5 + TSS region transcription start site region 146271
Tssr146272 17 94864937 to 94864946 9 + TSS region transcription start site region 146272
Gm23102 17 94869873 to 94869988 115 - snRNA gene predicted gene, 23102