Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
D17Jcs100 | 17 | 203 | DNA segment | DNA segment, Chr 17, John C. Schimenti 100 | ||
Gm17748 | 17 | 521 | - | pseudogene | predicted gene, 17748 | |
Gm17728 | 17 | 398 | + | protein coding gene | predicted gene, 17728 | |
Gm49807 | 17 | 44551 | + | lincRNA gene | predicted gene, 49807 | |
Pabpc6 | 17 | 3207 | - | protein coding gene | poly(A) binding protein, cytoplasmic 6 | |
Cpgi8604 | 17 | 499 | CpG island | CpG island 8604 | ||
Tssr146366 | 17 | 14 | - | TSS region | transcription start site region 146366 | |
Tssr146367 | 17 | 37 | - | TSS region | transcription start site region 146367 | |
Tssr146368 | 17 | 9 | - | TSS region | transcription start site region 146368 | |
Tssr5003 | 17 | 4 | - | TSS region | transcription start site region 5003 | |
D17Mit97 | 17 | 144 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 97 | ||
Gm34684 | 17 | 21019 | - | lincRNA gene | predicted gene, 34684 | |
D17Jcs102 | 17 | 199 | DNA segment | DNA segment, Chr 17, John C. Schimenti 102 | ||
4930452A19Rik | 17 | 25114 | - | lncRNA gene | RIKEN cDNA 4930452A19 gene | |
Tssr146369 | 17 | 3 | - | TSS region | transcription start site region 146369 | |
Tssr146370 | 17 | 10 | - | TSS region | transcription start site region 146370 | |
Gm34883 | 17 | 1723 | - | unclassified non-coding RNA gene | predicted gene, 34883 | |
Pcyts4 | 17 | 299 | QTL | plasmacytoma susceptibility 4 | ||
D17Mit57 | 17 | 299 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 57 | ||
Cfld3 | 17 | 299 | QTL | cystic fibrosis lung disease 3 | ||
Gm49808 | 17 | 17730 | + | lincRNA gene | predicted gene, 49808 | |
Tssr142566 | 17 | 27 | + | TSS region | transcription start site region 142566 | |
Gm34799 | 17 | 3174 | - | lincRNA gene | predicted gene, 34799 | |
Gm49809 | 17 | 460 | + | pseudogene | predicted gene, 49809 | |
D17Mit273 | 17 | 146 | DNA segment | DNA Segment, Chr 17, Massachusetts Institute of Technology-273 | ||
Tssr142567 | 17 | 5 | + | TSS region | transcription start site region 142567 | |
Tssr142568 | 17 | 10 | + | TSS region | transcription start site region 142568 | |
Tssr146371 | 17 | 10 | - | TSS region | transcription start site region 146371 | |
Gm34972 | 17 | 4312 | - | lncRNA gene | predicted gene, 34972 | |
D17Jcs112 | 17 | 216 | DNA segment | DNA segment, Chr 17, John C. Schimenti 112 | ||
D17Jcs111 | 17 | 235 | DNA segment | DNA segment, Chr 17, John C. Schimenti 111 | ||
Qk | 17 | 112890 | - | protein coding gene | quaking | |
Tssr146372 | 17 | 11 | - | TSS region | transcription start site region 146372 | |
Tssr146373 | 17 | 20 | - | TSS region | transcription start site region 146373 | |
Tssr146374 | 17 | 35 | - | TSS region | transcription start site region 146374 | |
Tssr146375 | 17 | 24 | - | TSS region | transcription start site region 146375 | |
Tssr146376 | 17 | 12 | - | TSS region | transcription start site region 146376 | |
Tssr146377 | 17 | 26 | - | TSS region | transcription start site region 146377 | |
Tssr146378 | 17 | 18 | - | TSS region | transcription start site region 146378 | |
Tssr146379 | 17 | 33 | - | TSS region | transcription start site region 146379 | |
Tssr146380 | 17 | 25 | - | TSS region | transcription start site region 146380 | |
Tssr146381 | 17 | 36 | - | TSS region | transcription start site region 146381 | |
Tssr146382 | 17 | 27 | - | TSS region | transcription start site region 146382 | |
Tssr146383 | 17 | 4 | - | TSS region | transcription start site region 146383 | |
Tssr146384 | 17 | 4 | - | TSS region | transcription start site region 146384 | |
D17Jcs113 | 17 | 300 | DNA segment | DNA segment, Chr 17, John C. Schimenti 113 | ||
Tssr146385 | 17 | 1 | - | TSS region | transcription start site region 146385 | |
Tssr146386 | 17 | 9 | - | TSS region | transcription start site region 146386 | |
Tssr146387 | 17 | 32 | - | TSS region | transcription start site region 146387 | |
D17Jcs114 | 17 | 263 | DNA segment | DNA segment, Chr 17, John C. Schimenti 114 | ||
Tssr146388 | 17 | 4 | - | TSS region | transcription start site region 146388 | |
Tssr146389 | 17 | 16 | - | TSS region | transcription start site region 146389 | |
Tssr146390 | 17 | 7 | - | TSS region | transcription start site region 146390 | |
Tssr146391 | 17 | 3 | - | TSS region | transcription start site region 146391 | |
D17Mit58 | 17 | 218 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 58 | ||
Tssr142569 | 17 | 2 | + | TSS region | transcription start site region 142569 | |
Dep1 | 17 | 4663 | unclassified non-coding RNA gene | diabetic embryopathy 1 | ||
Cpgi8605 | 17 | 2497 | CpG island | CpG island 8605 | ||
Tssr142570 | 17 | 17 | + | TSS region | transcription start site region 142570 | |
Tssr146392 | 17 | 16 | - | TSS region | transcription start site region 146392 | |
Tssr146393 | 17 | 22 | - | TSS region | transcription start site region 146393 | |
Tssr146394 | 17 | 11 | - | TSS region | transcription start site region 146394 | |
Tssr146395 | 17 | 21 | - | TSS region | transcription start site region 146395 | |
Tssr146396 | 17 | 56 | - | TSS region | transcription start site region 146396 | |
Tssr146397 | 17 | 11 | - | TSS region | transcription start site region 146397 | |
Gm46608 | 17 | 1786 | - | protein coding gene | predicted gene, 46608 | |
Tssr146398 | 17 | 18 | - | TSS region | transcription start site region 146398 | |
Tssr146399 | 17 | 51 | - | TSS region | transcription start site region 146399 | |
Tssr142571 | 17 | 38 | + | TSS region | transcription start site region 142571 | |
Cahm | 17 | 1222 | + | lncRNA gene | colon adenocarcinoma hypermethylated RNA | |
Tssr146400 | 17 | 20 | - | TSS region | transcription start site region 146400 | |
Tssr142572 | 17 | 17 | + | TSS region | transcription start site region 142572 | |
1700110C19Rik | 17 | 4705 | + | lincRNA gene | RIKEN cDNA 1700110C19 gene | |
Tssr142573 | 17 | 9 | + | TSS region | transcription start site region 142573 | |
Cpgi8606 | 17 | 634 | CpG island | CpG island 8606 | ||
Gm39565 | 17 | 3215 | + | lncRNA gene | predicted gene, 39565 | |
Cpgi8607 | 17 | 171 | CpG island | CpG island 8607 | ||
Cpgi8608 | 17 | 417 | CpG island | CpG island 8608 | ||
Pacrg | 17 | 437182 | - | protein coding gene | PARK2 co-regulated | |
D17Jcs115 | 17 | 200 | DNA segment | DNA segment, Chr 17, John C. Schimenti 115 | ||
A230009B12Rik | 17 | 36841 | + | antisense lncRNA gene | RIKEN cDNA A230009B12 gene | |
Tssr142574 | 17 | 5 | + | TSS region | transcription start site region 142574 | |
Tssr142575 | 17 | 11 | + | TSS region | transcription start site region 142575 | |
Tssr142576 | 17 | 25 | + | TSS region | transcription start site region 142576 | |
Tssr142577 | 17 | 14 | + | TSS region | transcription start site region 142577 | |
Tssr142578 | 17 | 7 | + | TSS region | transcription start site region 142578 | |
Gm16168 | 17 | 72950 | + | antisense lncRNA gene | predicted gene 16168 | |
D17Wtc1 | 17 | 214 | DNA segment | DNA segment, Chr 17, Wellcome Trust Centre | ||
Tssr146401 | 17 | 41 | - | TSS region | transcription start site region 146401 | |
Tssr142579 | 17 | 5 | + | TSS region | transcription start site region 142579 | |
D17Jcs116 | 17 | 303 | DNA segment | DNA segment, Chr 17, John C. Schimenti 116 | ||
Tssr146402 | 17 | 13 | - | TSS region | transcription start site region 146402 | |
Tssr146403 | 17 | 3 | - | TSS region | transcription start site region 146403 | |
Gm16169 | 17 | 11110 | + | lncRNA gene | predicted gene 16169 | |
Tssr142580 | 17 | 14 | + | TSS region | transcription start site region 142580 | |
Cpgi8609 | 17 | 1318 | CpG island | CpG island 8609 | ||
Tssr146404 | 17 | 9 | - | TSS region | transcription start site region 146404 | |
Tssr146405 | 17 | 14 | - | TSS region | transcription start site region 146405 | |
Tssr146406 | 17 | 72 | - | TSS region | transcription start site region 146406 | |
Tssr146407 | 17 | 12 | - | TSS region | transcription start site region 146407 | |
Tssr146408 | 17 | 11 | - | TSS region | transcription start site region 146408 | |
Tssr146409 | 17 | 14 | - | TSS region | transcription start site region 146409 | |
Tssr146410 | 17 | 8 | - | TSS region | transcription start site region 146410 | |
Tssr142581 | 17 | 44 | + | TSS region | transcription start site region 142581 | |
Prkn | 17 | 1222977 | + | protein coding gene | parkin RBR E3 ubiquitin protein ligase | |
Tssr142582 | 17 | 15 | + | TSS region | transcription start site region 142582 | |
Tssr146411 | 17 | 20 | - | TSS region | transcription start site region 146411 | |
D17Jcs117 | 17 | 318 | DNA segment | DNA segment, Chr 17, John C. Schimenti 117 | ||
Tssr142583 | 17 | 4 | + | TSS region | transcription start site region 142583 | |
Gm3145 | 17 | 219 | + | pseudogene | predicted gene 3145 | |
Lfnq4 | 17 | 28065571 | QTL | lung function QTL 4 | ||
D17Mit156 | 17 | 124 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 156 | ||
D17Jcs75 | 17 | 204 | DNA segment | DNA segment, Chr 17, John C. Schimenti 75 | ||
Flal1 | 17 | -3000000 | QTL | fatty liver accumulation QTL 1, females only | ||
Gm28505 | 17 | 7218 | - | antisense lncRNA gene | predicted gene 28505 | |
Gm41526 | 17 | 15757 | - | lncRNA gene | predicted gene, 41526 | |
Gm37402 | 17 | 4999 | + | unclassified gene | predicted gene, 37402 | |
Gm37332 | 17 | 2843 | - | unclassified gene | predicted gene, 37332 | |
Tssr142584 | 17 | 42 | + | TSS region | transcription start site region 142584 | |
Tssr142585 | 17 | 16 | + | TSS region | transcription start site region 142585 | |
D17Dcr31 | 17 | 99 | DNA segment | DNA Segment, Chr 17, Derry C. Roopenian 31 | ||
Tssr146412 | 17 | 9 | - | TSS region | transcription start site region 146412 | |
Tssr146413 | 17 | 7 | - | TSS region | transcription start site region 146413 | |
D17Jcs72 | 17 | 172 | DNA segment | DNA segment, Chr 17, John C. Schimenti 72 | ||
Gm28118 | 17 | 293 | - | pseudogene | predicted gene 28118 | |
Gm41525 | 17 | 25049 | - | lncRNA gene | predicted gene, 41525 | |
Gm10513 | 17 | 6467 | - | unclassified non-coding RNA gene | predicted gene 10513 | |
D17Jcs70 | 17 | 332 | DNA segment | DNA segment, Chr 17, John C. Schimenti 70 | ||
Tssr146414 | 17 | 2 | - | TSS region | transcription start site region 146414 | |
D17Ertd648e | 17 | 20119 | - | lncRNA gene | DNA segment, Chr 17, ERATO Doi 648, expressed | |
Gm46604 | 17 | 71921 | - | lncRNA gene | predicted gene, 46604 | |
Tssr146415 | 17 | 46 | - | TSS region | transcription start site region 146415 | |
Obrq13 | 17 | 12878353 | QTL | obesity resistance QTL 13 | ||
Circp2 | 17 | 124 | QTL | circadian photosensitivity 2 | ||
D17Mit113 | 17 | 124 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 113 | ||
Nrq1 | 17 | 124 | QTL | noise-induced hearing loss resistant QTL 1 | ||
Nrq1a | 17 | 124 | QTL | noise-induced hearing loss resistant QTL 1a | ||
Tssr142586 | 17 | 11 | + | TSS region | transcription start site region 142586 | |
Stheal11 | 17 | 70987015 | QTL | soft tissue heal 11 | ||
D17Mit245 | 17 | 199 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 245 | ||
Tssr142587 | 17 | 1 | + | TSS region | transcription start site region 142587 | |
Tssr146416 | 17 | 8 | - | TSS region | transcription start site region 146416 | |
Agpat4 | 17 | 100940 | + | protein coding gene | 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) | |
Cpgi8610 | 17 | 213 | CpG island | CpG island 8610 | ||
Tssr142588 | 17 | 26 | + | TSS region | transcription start site region 142588 | |
Tssr142589 | 17 | 14 | + | TSS region | transcription start site region 142589 | |
Tssr142590 | 17 | 74 | + | TSS region | transcription start site region 142590 | |
Tssr142591 | 17 | 11 | + | TSS region | transcription start site region 142591 | |
Tssr142592 | 17 | 12 | + | TSS region | transcription start site region 142592 | |
D17Jcs67 | 17 | 188 | DNA segment | DNA segment, Chr 17, John C. Schimenti 67 | ||
Tssr142593 | 17 | 18 | + | TSS region | transcription start site region 142593 | |
Tssr5004 | 17 | 4 | + | TSS region | transcription start site region 5004 | |
Tdgf1-ps2 | 17 | 535 | + | pseudogene | teratocarcinoma-derived growth factor, pseudogene 2 | |
Tssr142594 | 17 | 5 | + | TSS region | transcription start site region 142594 | |
Map3k4 | 17 | 91175 | - | protein coding gene | mitogen-activated protein kinase kinase kinase 4 | |
Gm46605 | 17 | 6700 | + | lncRNA gene | predicted gene, 46605 | |
D17Jcs66 | 17 | 180 | DNA segment | DNA segment, Chr 17, John C. Schimenti 66 | ||
Tssr146417 | 17 | 2 | - | TSS region | transcription start site region 146417 | |
Gm49962 | 17 | 417 | + | pseudogene | predicted gene, 49962 | |
Gm24794 | 17 | 139 | + | snoRNA gene | predicted gene, 24794 | |
Cpgi8611 | 17 | 1129 | CpG island | CpG island 8611 | ||
Tssr142595 | 17 | 5 | + | TSS region | transcription start site region 142595 | |
Tssr146418 | 17 | 12 | - | TSS region | transcription start site region 146418 | |
Tssr146419 | 17 | 9 | - | TSS region | transcription start site region 146419 | |
Tssr146420 | 17 | 36 | - | TSS region | transcription start site region 146420 | |
Tssr5005 | 17 | 8 | - | TSS region | transcription start site region 5005 | |
4732491K20Rik | 17 | 8397 | + | bidirectional promoter lncRNA gene | RIKEN cDNA 4732491K20 gene | |
Tssr142596 | 17 | 43 | + | TSS region | transcription start site region 142596 | |
Gm49964 | 17 | 1713 | - | lincRNA gene | predicted gene, 49964 | |
Lmr1 | 17 | -76826561 | QTL | leishmaniasis resistance 1 |