Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:90981811-91492557

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nrxn1 17 90033631 to 91093071 1059440 - protein coding gene neurexin I
Tssr149862 17 90992560 to 90992566 6 - TSS region transcription start site region 149862
Tssr149863 17 90995538 to 90995543 5 - TSS region transcription start site region 149863
Tssr149864 17 90995551 to 90995594 43 - TSS region transcription start site region 149864
Tssr149865 17 91024674 to 91024677 3 - TSS region transcription start site region 149865
9330159H11Rik 17 91025047 to 91038000 12953 - lncRNA gene RIKEN cDNA 9330159H11 gene
D17Mit96 17 91047347 to 91047495 148 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 96
D17Mit96.2 17 91047467 to 91047597 130 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 96.2
Tssr149866 17 91057369 to 91057372 3 - TSS region transcription start site region 149866
Tssr149867 17 91065198 to 91065201 3 - TSS region transcription start site region 149867
Cpgi9652 17 91087727 to 91089199 1472 CpG island CpG island 9652
Tssr146256 17 91088212 to 91088215 3 + TSS region transcription start site region 146256
Gm47307 17 91088406 to 91088550 144 + miRNA gene predicted gene, 47307
Gm10308 17 91088493 to 91089391 898 + protein coding gene predicted gene 10308
Tssr149868 17 91088823 to 91088858 35 - TSS region transcription start site region 149868
Tssr146257 17 91088852 to 91088885 33 + TSS region transcription start site region 146257
Tssr149869 17 91088985 to 91089014 29 - TSS region transcription start site region 149869
Cpgi9653 17 91092629 to 91092969 340 CpG island CpG island 9653
Tssr149870 17 91092715 to 91092822 107 - TSS region transcription start site region 149870
Tssr149871 17 91092823 to 91092858 35 - TSS region transcription start site region 149871
Tssr149872 17 91092860 to 91092877 17 - TSS region transcription start site region 149872
Tssr149873 17 91092984 to 91092995 11 - TSS region transcription start site region 149873
Tssr149874 17 91093018 to 91093029 11 - TSS region transcription start site region 149874
Tssr149875 17 91093070 to 91093077 7 - TSS region transcription start site region 149875
Gm9410 17 91106046 to 91107296 1250 + pseudogene predicted gene 9410
Gm27475 17 91106210 to 91106270 60 + miRNA gene predicted gene, 27475
Gm9411 17 91125116 to 91126194 1078 + pseudogene predicted gene 9411
Gm6741 17 91236811 to 91237557 746 + pseudogene predicted gene 6741
Gm49988 17 91347068 to 91347572 504 - pseudogene predicted gene, 49988