Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:89969889-90940498

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aaj4 17 74282094 to 90087842 15805748 QTL anxiety in A/J 4
Axtq3 17 74282094 to 90087842 15805748 QTL anxiety QTL 3
Gm41653 17 89958752 to 89976632 17880 - lncRNA gene predicted gene, 41653
Nrxn1 17 90033631 to 91093071 1059440 - protein coding gene neurexin I
Tssr149815 17 90035842 to 90035863 21 - TSS region transcription start site region 149815
Tssr149816 17 90036279 to 90036290 11 - TSS region transcription start site region 149816
Tssr149817 17 90036433 to 90036436 3 - TSS region transcription start site region 149817
Tssr149818 17 90036684 to 90036713 29 - TSS region transcription start site region 149818
Tssr149819 17 90036720 to 90036741 21 - TSS region transcription start site region 149819
Tssr149820 17 90036744 to 90036758 14 - TSS region transcription start site region 149820
Tssr149821 17 90036775 to 90036786 11 - TSS region transcription start site region 149821
Tssr149822 17 90036807 to 90036818 11 - TSS region transcription start site region 149822
Tssr146252 17 90036895 to 90036901 6 + TSS region transcription start site region 146252
Tssr149823 17 90037141 to 90037164 23 - TSS region transcription start site region 149823
Tssr149824 17 90037188 to 90037204 16 - TSS region transcription start site region 149824
Tssr149825 17 90037209 to 90037231 22 - TSS region transcription start site region 149825
Tssr149826 17 90037285 to 90037300 15 - TSS region transcription start site region 149826
Tssr146253 17 90048080 to 90048084 4 + TSS region transcription start site region 146253
Tssr5232 17 90075119 to 90075126 7 + TSS region transcription start site region 5232
Nilac11 17 90087704 to 90087842 138 QTL nicotine induced locomotor activity 11
Nhdlq3 17 90087704 to 90087842 138 QTL non-HDL QTL 3
D17Mit221 17 90087704 to 90087842 138 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 221
Tssr149827 17 90088194 to 90088227 33 - TSS region transcription start site region 149827
Tssr149828 17 90088279 to 90088320 41 - TSS region transcription start site region 149828
Tssr149829 17 90088322 to 90088341 19 - TSS region transcription start site region 149829
Tssr149830 17 90088343 to 90088373 30 - TSS region transcription start site region 149830
Tssr146254 17 90088461 to 90088508 47 + TSS region transcription start site region 146254
Tssr149831 17 90144032 to 90144054 22 - TSS region transcription start site region 149831
Tssr149832 17 90144056 to 90144068 12 - TSS region transcription start site region 149832
2900054C15Rik 17 90173140 to 90174015 875 unclassified gene RIKEN cDNA 2900054C15 gene
Tssr149833 17 90178568 to 90178573 5 - TSS region transcription start site region 149833
Tssr146255 17 90179294 to 90179296 2 + TSS region transcription start site region 146255
Gm24510 17 90262552 to 90262645 93 + miRNA gene predicted gene, 24510
Tssr149834 17 90292589 to 90292591 2 - TSS region transcription start site region 149834
Tssr149835 17 90313287 to 90313299 12 - TSS region transcription start site region 149835
Tssr149836 17 90346597 to 90346601 4 - TSS region transcription start site region 149836
Tssr149837 17 90376025 to 90376031 6 - TSS region transcription start site region 149837
Tssr149838 17 90400359 to 90400367 8 - TSS region transcription start site region 149838
Tssr149839 17 90422332 to 90422343 11 - TSS region transcription start site region 149839
Tssr149840 17 90429250 to 90429256 6 - TSS region transcription start site region 149840
Tssr149841 17 90445094 to 90445103 9 - TSS region transcription start site region 149841
Tssr149842 17 90447650 to 90447659 9 - TSS region transcription start site region 149842
Tssr149843 17 90448706 to 90448713 7 - TSS region transcription start site region 149843
Cpgi9649 17 90454353 to 90456144 1791 CpG island CpG island 9649
Gm10493 17 90454889 to 90455498 609 + pseudogene predicted gene 10493
Gm32337 17 90455694 to 90465216 9522 + lncRNA gene predicted gene, 32337
Tssr149844 17 90455943 to 90456026 83 - TSS region transcription start site region 149844
Tssr149845 17 90456030 to 90456049 19 - TSS region transcription start site region 149845
Gm19815 17 90567423 to 90567757 334 - pseudogene predicted gene, 19815
Cpgi9650 17 90567756 to 90567907 151 CpG island CpG island 9650
Tssr149846 17 90599335 to 90599339 4 - TSS region transcription start site region 149846
Tssr149847 17 90603558 to 90603566 8 - TSS region transcription start site region 149847
Tssr149848 17 90606898 to 90606916 18 - TSS region transcription start site region 149848
Tssr149849 17 90607071 to 90607083 12 - TSS region transcription start site region 149849
Tssr149850 17 90607113 to 90607118 5 - TSS region transcription start site region 149850
Tssr149851 17 90611927 to 90611969 42 - TSS region transcription start site region 149851
Tssr149852 17 90622376 to 90622407 31 - TSS region transcription start site region 149852
Cpgi9651 17 90623418 to 90623679 261 CpG island CpG island 9651
Tssr149853 17 90658045 to 90658052 7 - TSS region transcription start site region 149853
Tssr149854 17 90747206 to 90747217 11 - TSS region transcription start site region 149854
C030011I16Rik 17 90764304 to 90765484 1180 unclassified gene RIKEN cDNA C030011I16 gene
Tssr149855 17 90789918 to 90789921 3 - TSS region transcription start site region 149855
Gm20491 17 90792442 to 90793476 1034 - pseudogene predicted gene 20491
Tssr149856 17 90798122 to 90798126 4 - TSS region transcription start site region 149856
Tssr149857 17 90800584 to 90800588 4 - TSS region transcription start site region 149857
9330164J24Rik 17 90800970 to 90803287 2317 unclassified gene RIKEN cDNA 9330164J24 gene
Tssr149858 17 90834235 to 90834240 5 - TSS region transcription start site region 149858
D17Mit244 17 90854524 to 90854645 121 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 244
4930480K15Rik 17 90861169 to 90867102 5933 + lncRNA gene RIKEN cDNA 4930480K15 gene
Tssr149859 17 90868022 to 90868025 3 - TSS region transcription start site region 149859
2900084O13Rik 17 90878110 to 90879367 1257 unclassified gene RIKEN cDNA 2900084O13 gene