Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:89551433-90521436

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Axtq3 17 74282094 to 90087842 15805748 QTL anxiety QTL 3
Aaj4 17 74282094 to 90087842 15805748 QTL anxiety in A/J 4
Gm50061 17 89701897 to 89752526 50629 - lincRNA gene predicted gene, 50061
Tssr146251 17 89718097 to 89718098 1 + TSS region transcription start site region 146251
Gm10184 17 89908475 to 89910447 1972 - pseudogene predicted pseudogene 10184
Tssr149814 17 89910439 to 89910446 7 - TSS region transcription start site region 149814
Gm41653 17 89958752 to 89976632 17880 - lncRNA gene predicted gene, 41653
Nrxn1 17 90033631 to 91093071 1059440 - protein coding gene neurexin I
Tssr149815 17 90035842 to 90035863 21 - TSS region transcription start site region 149815
Tssr149816 17 90036279 to 90036290 11 - TSS region transcription start site region 149816
Tssr149817 17 90036433 to 90036436 3 - TSS region transcription start site region 149817
Tssr149818 17 90036684 to 90036713 29 - TSS region transcription start site region 149818
Tssr149819 17 90036720 to 90036741 21 - TSS region transcription start site region 149819
Tssr149820 17 90036744 to 90036758 14 - TSS region transcription start site region 149820
Tssr149821 17 90036775 to 90036786 11 - TSS region transcription start site region 149821
Tssr149822 17 90036807 to 90036818 11 - TSS region transcription start site region 149822
Tssr146252 17 90036895 to 90036901 6 + TSS region transcription start site region 146252
Tssr149823 17 90037141 to 90037164 23 - TSS region transcription start site region 149823
Tssr149824 17 90037188 to 90037204 16 - TSS region transcription start site region 149824
Tssr149825 17 90037209 to 90037231 22 - TSS region transcription start site region 149825
Tssr149826 17 90037285 to 90037300 15 - TSS region transcription start site region 149826
Tssr146253 17 90048080 to 90048084 4 + TSS region transcription start site region 146253
Tssr5232 17 90075119 to 90075126 7 + TSS region transcription start site region 5232
Nilac11 17 90087704 to 90087842 138 QTL nicotine induced locomotor activity 11
Nhdlq3 17 90087704 to 90087842 138 QTL non-HDL QTL 3
D17Mit221 17 90087704 to 90087842 138 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 221
Tssr149827 17 90088194 to 90088227 33 - TSS region transcription start site region 149827
Tssr149828 17 90088279 to 90088320 41 - TSS region transcription start site region 149828
Tssr149829 17 90088322 to 90088341 19 - TSS region transcription start site region 149829
Tssr149830 17 90088343 to 90088373 30 - TSS region transcription start site region 149830
Tssr146254 17 90088461 to 90088508 47 + TSS region transcription start site region 146254
Tssr149831 17 90144032 to 90144054 22 - TSS region transcription start site region 149831
Tssr149832 17 90144056 to 90144068 12 - TSS region transcription start site region 149832
2900054C15Rik 17 90173140 to 90174015 875 unclassified gene RIKEN cDNA 2900054C15 gene
Tssr149833 17 90178568 to 90178573 5 - TSS region transcription start site region 149833
Tssr146255 17 90179294 to 90179296 2 + TSS region transcription start site region 146255
Gm24510 17 90262552 to 90262645 93 + miRNA gene predicted gene, 24510
Tssr149834 17 90292589 to 90292591 2 - TSS region transcription start site region 149834
Tssr149835 17 90313287 to 90313299 12 - TSS region transcription start site region 149835
Tssr149836 17 90346597 to 90346601 4 - TSS region transcription start site region 149836
Tssr149837 17 90376025 to 90376031 6 - TSS region transcription start site region 149837
Tssr149838 17 90400359 to 90400367 8 - TSS region transcription start site region 149838
Tssr149839 17 90422332 to 90422343 11 - TSS region transcription start site region 149839
Tssr149840 17 90429250 to 90429256 6 - TSS region transcription start site region 149840
Tssr149841 17 90445094 to 90445103 9 - TSS region transcription start site region 149841
Tssr149842 17 90447650 to 90447659 9 - TSS region transcription start site region 149842
Tssr149843 17 90448706 to 90448713 7 - TSS region transcription start site region 149843
Cpgi9649 17 90454353 to 90456144 1791 CpG island CpG island 9649
Gm10493 17 90454889 to 90455498 609 + pseudogene predicted gene 10493
Gm32337 17 90455694 to 90465216 9522 + lncRNA gene predicted gene, 32337
Tssr149844 17 90455943 to 90456026 83 - TSS region transcription start site region 149844
Tssr149845 17 90456030 to 90456049 19 - TSS region transcription start site region 149845